Ezakiella coagulans: M1R54_00200
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Entry
M1R54_00200 CDS
T08131
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecou
Ezakiella coagulans
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecou03016
]
M1R54_00200 (truB)
Enzymes [BR:
ecou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M1R54_00200 (truB)
Transfer RNA biogenesis [BR:
ecou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M1R54_00200 (truB)
Prokaryotic type
M1R54_00200 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
UQK60762
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All DBs
Position
37949..38818
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AA seq
289 aa
AA seq
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MSSKLDGILLVNKKKGMTSYDVIRKIKLAFKEMDIKTKIGHSGTLDPFAEGLLVILLGKY
TRMSDYLMDLEKTYSGTFVQGVGTDTLDLDGEIIERTKTLAPEIILSNISNFIGEQMQVP
PFYSALKHNGKKLYEYARKGENITKPPRKIFVYELSISKESSESFSFITRVSKGTYVRKL
IYDYTTSLGVASYLTSLKREKMGEFSLEDARVIEEITPENIEKNLMTIKDINLPYERIVL
SVDEREKLSNGIRIKTEHDETDVVLIEAENTVFAFGGVKDGQIYTRFFI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaaacttgacggcattcttcttgtaaacaagaaaaagggcatgacgagctat
gatgtgattcggaagattaaacttgcatttaaggaaatggacataaagacgaaaatcggt
cattccggcactttggatccgtttgcggaagggcttctcgtgattctccttggtaaatat
acgagaatgagcgattatctgatggatctcgaaaaaacttacagcggcacattcgttcaa
ggtgtcggcacggatacattggatcttgacggagagattatagaacgcacaaagacactt
gctcccgaaattattctttcaaatatctcgaattttatcggggaacaaatgcaagtgccg
ccattttacagtgccttgaaacacaacggaaagaagctctatgaatatgcgagaaaaggc
gaaaacataacaaaaccgccgagaaaaatatttgtatatgagctttctatctcgaaggag
tcgagcgaaagtttttcatttataacgcgagtttcaaagggcacttatgtaagaaaactc
atttacgattacacgacgagtttgggtgtcgcatcttatctcacgagtttaaaaagagaa
aagatgggagaattctcacttgaagatgctcgagttatcgaggagataacccccgaaaat
atcgagaaaaatctaatgacgattaaggatataaatttgccgtatgaacgtatagttctt
tcggtggatgagcgtgaaaaactttcgaacggaatcagaattaagacggagcatgacgaa
acagatgtggttcttatagaagcagagaatactgtctttgcattcggcggagttaaagac
ggacagatatacacaagattttttatttga
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