Ezakiella coagulans: M1R54_00440
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Entry
M1R54_00440 CDS
T08131
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ecou
Ezakiella coagulans
Pathway
ecou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1R54_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecou03019
]
M1R54_00440
03016 Transfer RNA biogenesis [BR:
ecou03016
]
M1R54_00440
Enzymes [BR:
ecou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M1R54_00440
Messenger RNA biogenesis [BR:
ecou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M1R54_00440
Transfer RNA biogenesis [BR:
ecou03016
]
Prokaryotic type
tRNA degradation factors
M1R54_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
UQK60809
LinkDB
All DBs
Position
83028..85232
Genome browser
AA seq
734 aa
AA seq
DB search
MEKIFKFDLAGRELSVTIGKYAEQANGACMVRYGDSVVLVTATSSKTPREGIDFFPLSVD
YEEKYYAAGKIPGGFIKREGRPSEHAVLTSRLIDRPLRPLFPEGYRNDVQIIASLLSSDP
DASSEITAMIGSSIALSISDIPFDGPTGAVQVGYIDGKYIINPTKDELEKTDINLTVAGT
EEAIMMVESGSFEVSEDEMLDAIMTAHEEIKKICRFINEIKEEVGKEKQEFTPFVINPEV
FAAIKEKYGQDLYDAMNNADKNVRVKLTDEVTDRIKSDMSEIFPEEGLSINASIDKLLYN
EVRREILEDHIRPDMRKFDEIRPLSAEAGILPRTHGSGLFKRGQTQVLSIATLGVGSDAQ
IIDGMDDEYEKKYIHHYNFPPYSVGDTRPLRGPGRREIGHGALAERALVPVIPSQEDFPY
TIRVVSEVLSSNGSSSQASICGSTLALMDAGVPITKPVAGIAMGLITDESGEKMAILTDI
QGLEDHLGDMDFKVAGTRDGITALQMDIKIKGVSREILSEALAAAHKARMQILDVIHDAI
SEPRTEISKYAPRIIKLNIDPDKIRDVIGPGGKVINQIIAKTGVKIDIEDDGTVLIASAD
SEMGNAAKQIVLDITKEVEVGEIYTGKVTKLMKFGAFIDVLNGKEGLLHISNIDYKRVDK
VEDVYKVGDVVEVKVIGIDDEGRIDLSRKALLPKPEGIEEDDNKNQNRHSDNHRNNQGPR
RSKRHEDREKNSNN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatatttaaattcgacctggcaggtcgagagctatccgttaccatcggtaaa
tacgcagaacaagctaacggagcttgtatggtaagatatggagatagcgttgtacttgtt
acagcaacaagttctaaaacaccgagagaaggtatagactttttccctttgagtgttgat
tacgaagagaaatattatgctgctggaaaaattccgggaggttttattaagagagaggga
agaccgagcgagcacgctgttttaacatcaagactgattgacagaccgctaagaccgctt
ttccctgaaggatatagaaatgatgtgcaaattatagcaagtctactttcaagtgatccg
gatgcctcatctgaaatcacagcaatgattggctcttcaattgcactatccatttcagat
attccttttgacggaccgacaggtgctgttcaagtaggatatattgatggaaaatatatt
attaatcctacaaaagatgagcttgaaaaaacagatataaatcttacggttgcaggaacc
gaagaagctatcatgatggttgagtcaggctcttttgaagtgtctgaagatgaaatgctt
gatgcaatcatgacagcacatgaagaaataaagaaaatctgcagatttataaatgaaata
aaagaagaagttggaaaagaaaaacaggaattcactccatttgtgataaatcctgaagtt
tttgctgcaataaaagaaaaatatggacaagatctatacgatgcaatgaataacgcagac
aaaaacgttcgtgtaaaattaactgatgaagttacagacagaatcaaatctgatatgtct
gaaattttccctgaagaaggtttaagcatcaatgcttcaatcgataaacttctttataac
gaagtaagacgcgaaattttggaagatcacatcagacctgacatgagaaagtttgatgaa
attagaccgctatcagctgaagccggtatcttacctagaacacacggttcaggtctcttc
aagagaggtcaaacgcaagtattaagtattgcaactcttggtgtcggatcagacgctcaa
atcattgatggaatggatgatgaatacgaaaagaaatatattcaccactataacttcccg
ccatattcagtcggtgatactagaccattaagaggacctggaagacgtgaaatcggacac
ggtgcacttgctgaaagagcacttgttccggtaattccaagccaagaagattttccgtat
actatcagagttgtttctgaagttttaagctcaaacggaagttcatcacaagcaagtata
tgtggatcaacacttgctcttatggatgcaggtgttccaattacaaaacctgttgcaggt
attgctatgggtcttattaccgatgaatccggtgaaaagatggccattcttactgatatc
caaggtcttgaagatcacttgggagacatggactttaaagttgccggaacgagagatggt
attactgctctacaaatggatataaagattaaaggtgtaagccgtgaaatcctttcagaa
gctcttgcagcagcacacaaagcacgcatgcaaatacttgatgttatacatgacgctata
agtgagcctagaacagaaatttcaaaatatgcaccacgcataattaagctcaatatcgat
cctgacaagattagagatgtcatcggacctggcggaaaggtaataaaccaaattattgca
aaaacaggtgttaaaattgacattgaagatgacggaacagttcttattgcaagtgccgat
tccgaaatgggcaacgcagcaaaacaaattgtgctcgatattacaaaagaagttgaagtt
ggagaaatttacaccggtaaagttactaaacttatgaaattcggtgcatttatcgacgtt
ctaaatggtaaagaaggtcttcttcacatttcaaatattgattacaagagagttgacaaa
gttgaagacgtatacaaagttggcgatgtagtagaagtaaaggttatcggaatcgacgat
gaaggcagaattgatttatcaagaaaagctcttcttccaaagccggaaggtattgaagaa
gacgacaataagaatcaaaatagacactccgacaaccacagaaacaatcaaggtccgaga
cgttcaaaacgtcatgaagacagagagaaaaattcaaataattaa
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