Ezakiella coagulans: M1R54_02655
Help
Entry
M1R54_02655 CDS
T08131
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ecou
Ezakiella coagulans
Pathway
ecou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M1R54_02655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecou03400
]
M1R54_02655
Enzymes [BR:
ecou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M1R54_02655
DNA repair and recombination proteins [BR:
ecou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M1R54_02655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
nSTAND3
AAA_12
PhoH
PIF1
SLFN-g3_helicase
UvrD_C
AAA
ATPase_2
AAA_16
HHH_2
NAT10_TcmA_helicase
T2SSE
AAA_28
UvrD-helicase
DEAD
TsaE
TrwB_AAD_bind
HHH
NTPase_1
HHH_3
NPHP3_N
AAA_29
AAA_23
AAA_18
ABC_ATPase
RNA_pol_A_CTD
AAA_17
NACHT
Mg_chelatase
cobW
Motif
Other DBs
NCBI-ProteinID:
UQK61215
LinkDB
All DBs
Position
complement(540161..542371)
Genome browser
AA seq
736 aa
AA seq
DB search
MIIKGSIERIIYKNDDNGFAVFLFDTEDDDIICTGNILSPSVGIPLELEGDIIVHSKYGE
QFSFTSYKVLDDMSAAGVYNYLKSGNLPYIGEEVAKDIVDKFGEDTMDMLENNPEKLLTI
KGIGPKKLHKIKEALEIGKLARKSIVDLAELGIFGQDAYNIYNIYQDNAKSMIMDDPYRL
IKDVRGFGFFKADRIARTVGIGELDIRRVQAAIMYVIYDSRLEGNIFLYESEIRTRLKRL
LKKDAPDFDVALQELIIKGDVVRKPSTGEPMIYPTVLNAIENSAASKTVQLIKRPKPFRA
GVKEILENLFENKNISYDETQKQAIEMALLNNIAIITGGPGTGKTTIVRAILEGLRELKL
SFVLAAPTGRAAKRLEESSGVDAATLHRLLSLRPSDDDDNFIMDVEDIDADVVIVDEMSM
VDINLYQKLLESMGEDTSLIMVGDADQLPSVGPGNVLKDLLRVEEMPKVKLETIHRTVDT
SEIAVVAKTIKEGGEPKFNEKDSDVFFLDEYNHEDFLNELVELVDSRLPNHYGFDKFNDI
QILSPTRKGEIGVNNLNVVLQEKLNPEKKMILKHSDRMFKLGDKVMQITNNYDREIKYKT
IERGTTKGVFNGDIGIVTDVDIENSQLTVLFSDDYYAVYDDDDLRELELAYAITVHKSQG
SEFPCIIFIAWARNIFLNNRNLLYTGITRAKELLISMGSRDVFRTMIKNTEVQKRNTTLK
EKIDEVIKFEEGLLDM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaagggcagtatcgaaagaataatttataaaaacgacgacaacggttttgcc
gtgtttctttttgatacggaagatgacgacatcatttgtaccggaaatattctatcgcca
agcgtcggaattccattggagctcgaaggagacattatcgttcattcgaaatacggagaa
cagttcagctttacgagttacaaagttttggacgatatgagcgccgccggagtttacaac
tatttaaagtcgggaaatcttccttacatcggcgaagaagttgcgaaggatatcgtggac
aaattcggagaagacacgatggatatgctcgaaaacaatccggaaaaacttttgacgata
aagggaatcggtccgaaaaaattacataagataaaggaagcactcgaaatcggaaagctt
gcgagaaagtcgattgtcgaccttgcggagctcggcatttttggacaggacgcatataat
atctacaatatttatcaggacaatgcaaaaagtatgattatggatgacccgtatcgcctc
ataaaagatgtgcgcggtttcggcttttttaaggcggacagaatcgcacgaactgtgggc
atcggagagctcgacataagaagagtacaagcggcgataatgtacgtcatttacgattcg
agactcgagggcaatatttttctctatgagagcgaaatcagaactcgattaaaacgcctt
ctaaaaaaagatgcaccggattttgacgttgcacttcaggagctcataataaagggagat
gttgtaagaaagccgtcgacgggagagccgatgatttatccgacggttttaaatgcgatt
gaaaacagtgccgcaagtaaaactgttcagctcataaaaagaccgaagcctttcagggcg
ggcgtgaaggaaatacttgaaaatcttttcgaaaacaagaacatctcatacgacgaaacg
caaaaacaggcgattgagatggcgcttctaaacaatattgcaatcataaccggcggaccg
ggaacgggaaagaccacgattgttcgtgcaattctcgaaggcttgcgggagcttaaactc
agttttgttttggcggcaccgacaggacgtgcggcaaaaagactcgaggaaagctcggga
gtcgatgcggcgacactccacagacttcttagtttgagaccgtcggacgatgacgacaat
tttataatggacgtagaggacatcgacgccgatgttgtgattgtcgatgagatgagtatg
gtcgatataaatctctatcaaaagctgttggagtctatgggagaggacacgtcgctcatt
atggtgggagatgcggaccagcttccgagtgtcggaccgggaaatgttttaaaggatctc
cttcgagtcgaggaaatgccgaaggttaagctcgaaacaattcacagaactgttgacaca
agcgagattgcggttgttgcaaagactataaaagagggcggtgagccaaaatttaatgaa
aaggattcggacgttttctttttggatgaatacaaccatgaggacttcttaaatgaattg
gtcgaacttgtggactcgagactgccgaaccactacggatttgacaaattcaatgatatt
caaatcctttctccaacgagaaagggtgaaatcggagtgaacaatttaaatgttgtgctg
caggaaaaattgaatccggaaaagaaaatgattttaaagcacagcgacagaatgtttaaa
ctcggcgacaaagtcatgcaaataacaaacaactatgaccgcgagattaaatataagaca
atcgaacgtggcacgacgaagggagtttttaacggcgatatcggaatcgtgaccgacgtt
gacattgaaaattcacaactaacggttctcttttccgatgattactatgcggtgtatgac
gatgacgatttgagagaactcgagcttgcttatgcaatcaccgttcacaaatcgcaaggc
tcggaatttccgtgcataattttcattgcatgggcgagaaatatatttttgaacaacaga
aatcttctctacaccggaatcacgcgtgcgaaagaacttttgatttcgatgggcagccga
gatgtttttcgcacaatgataaaaaacaccgaagtgcaaaagagaaatacaacacttaaa
gaaaagattgacgaggtaataaaatttgaagaaggcctgcttgatatgtaa
DBGET
integrated database retrieval system
