Ezakiella coagulans: M1R54_03270
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Entry
M1R54_03270 CDS
T08131
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ecou
Ezakiella coagulans
Pathway
ecou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M1R54_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecou03021
]
M1R54_03270
03400 DNA repair and recombination proteins [BR:
ecou03400
]
M1R54_03270
Enzymes [BR:
ecou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M1R54_03270
Transcription machinery [BR:
ecou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M1R54_03270
DNA repair and recombination proteins [BR:
ecou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M1R54_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DtxR
DUF1923
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UQK61328
LinkDB
All DBs
Position
complement(678365..679318)
Genome browser
AA seq
317 aa
AA seq
DB search
MEIEKPIIEILDMSEDKSYAKISIEPLERGYGTTLGNSMRRVLLSSLPGSSISNIRIQGV
LHEFSTIEGVYEDVPEIILNIKNLAIKSYTKEPQKLLIDVKGPKEVTGADIITGTDCDII
NKDLKIATVNKNGHLVIEMDLTHGRGYVLQEKNKEALKESTSIGDIPIDSEFTPVKKVNF
KIENTRVGQITDYDRLVLEIWTNGTINADEAASLGARILIEHLSLISGLCENMDQGGILK
LRDDRAKQRYLKMSIEELDLSVRSFNSLKRANINTVAELTEKSEDDMLKVRNLGRKSLEE
VINKLAEYGLSLKETES
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaaaagcctattatcgaaattttagatatgagcgaggacaagagctacgct
aaaatctctatcgagccgcttgaaagaggatatggaactactttaggaaactcaatgaga
agggtacttctatcaagtcttccgggaagcagcatttctaatattcgaattcaaggagtt
cttcatgaattttcaactattgaaggtgtttatgaagatgttccggaaattattctaaat
ataaaaaacttggctataaaaagctatacaaaagaaccacaaaaacttcttatcgatgta
aagggcccgaaggaagttacaggggcggacattattacaggaacggactgtgatattatt
aataaagatttaaaaatcgcaaccgttaataaaaatggacacctagtcattgaaatggac
cttacacacggcagaggttatgtgctccaagaaaagaataaagaagctttaaaagaatcc
acatccataggggatattccaatcgactcagaatttacacctgtaaagaaagtgaatttt
aaaatagaaaacactagagtcggacaaattacagactatgacagattggttttggaaatt
tggacgaatggaaccataaacgcggatgaagcggcctccttgggcgcaagaattttaatc
gaacatttaagtctcataagcggtctatgcgaaaatatggaccaaggtgggatattaaaa
ttaagagatgatcgtgcaaagcaaagatatttgaagatgtcaattgaagaacttgatttg
agcgttcgttcattcaacagcttgaagagagcaaacatcaacacagttgctgaacttaca
gaaaagtcggaagacgatatgttaaaagtcagaaaccttggaagaaaaagtttggaagaa
gtcatcaacaaattggctgaatacggtcttagtttaaaagaaactgaaagttaa
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