Ezakiella coagulans: M1R54_08400
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Entry
M1R54_08400 CDS
T08131
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ecou
Ezakiella coagulans
Pathway
ecou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M1R54_08400 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecou03400
]
M1R54_08400 (uvrB)
DNA repair and recombination proteins [BR:
ecou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M1R54_08400 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M1R54_08400 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
NPHP3_N
Oxidored_nitro
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UQK60526
LinkDB
All DBs
Position
1758548..1760524
Genome browser
AA seq
658 aa
AA seq
DB search
MDFKLHSKFKMTGDQPEAVEKLVNSIKSGNKFQTLKGVTGSGKTFTMANIIEKTQLPTLV
IAHNKTLAYQLCMELRDFFPENSVEYFVSYYDYYQPEAYVPSTDTYIAKDSAINDEIDKL
RHSATAALFERKDVIIVASVSCIYGLGDPEDYISLMVSLRPGMRKDRDKVIEELIAIQYI
RNDINFIRGTFRVRGDVLDIFPASESENSIRVEFFGDEIERITEINSMTGEILGEMRHAS
IFPASHFATTDRKVKRAIVTIEEELESRLKELRDQDHLLYAERLEQRTRYDLEMLREIGF
CSGIENYSRHMSGRRPGSRPYTLIDYFPEDFLIIADESHVTIPQVRGMYAGDRSRKQTLV
DYGFRLPSALDNRPLNFDEFQSLIKHILFVSATPGPYEQEKSEVIAEQILRPTGLLDPKI
IVRPIKNQIDDLLERIRDRIEKKERVLITTLTKKMAEDLTDYLEELGIKVSYMHSDTETI
DRMKIIKDLRTGDIDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTVGRAA
RNANGEVVMYADRITDSMKNTIEITEKRRNIQEEYNKEHNITPKSIVKDIREVIGILKDD
KKTPKKKDSELSAEELENIVRELKARMLEAAERLDFEAAANFRDEMKKFQNQLDKKKR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggactttaaattacattcaaaattcaaaatgactggagaccagcccgaagctgttgaa
aaattagtaaattctataaaatcaggcaataaatttcaaacgttaaaaggggttacgggt
tccggaaaaactttcacgatggcaaatataatcgaaaagactcagctgccgacactcgta
attgcacacaataaaacacttgcgtatcaactgtgcatggagctcagagattttttcccg
gaaaacagtgtagaatattttgtaagttattatgattattatcaaccggaggcgtatgtt
ccgtcaacggacacatatattgcaaaggactccgcaataaacgacgagatagataagctt
cgccactcggcgacggcggcactttttgaaagaaaagacgtaataattgtcgcatctgtt
tcttgtatttacggtttaggggacccggaggactacatcagccttatggtttctttgaga
ccgggcatgcgaaaagatcgcgacaaggtcattgaggaacttattgcaattcaatatatt
agaaatgatattaattttattcgcggtacttttagagtgcgtggagatgttttggatatt
ttcccggctagcgagagcgaaaactcgattcgagttgaatttttcggagacgaaattgaa
agaattacagagataaatagtatgaccggagaaattttgggagagatgaggcacgcttcg
attttcccggcatctcactttgctacgaccgacagaaaagttaaacgtgcaatcgttaca
atagaagaggaacttgaaagcagactcaaagagcttcgagatcaggaccatcttctttac
gccgaaagacttgaacaaagaacgagatatgatctcgaaatgcttagagaaatcggattt
tgctcgggtattgaaaactactcgaggcacatgtcgggaagacgtccgggctcaagacca
tacacgttgattgactattttccggaagattttctaataattgccgacgaatcgcatgtc
acgattccgcaagtcagaggaatgtatgcgggcgaccgctcgagaaagcagacgcttgtt
gactacggcttcagactgccttcggcactcgacaatagaccgctaaactttgacgagttc
caatcactcataaaacatattttatttgtctcggcaacacctggaccgtatgaacaggaa
aagtccgaagttatagcagagcaaattctaagacctacgggacttttggacccgaagatt
atagttcgacctattaaaaatcaaatcgatgatctcttggaaagaattcgggacagaatt
gagaaaaaagaaagagttttaataacgacactcacgaaaaaaatggcagaagacttgacg
gactatttggaagagctcggaattaaggtcagctatatgcactccgacacagagacaatc
gacagaatgaagattataaaggatttaagaaccggagacatcgatgtgctagtcgggatt
aaccttctacgtgaaggactcgacttgccggaagtttcacttgttgcaattcttgatgcg
gacaaagaaggattcctaaggtccgaaacttcgctcatccaaaccgtcggaagagcggca
agaaatgcaaatggcgaagttgttatgtatgccgatagaataacggattcaatgaaaaac
acaattgaaattacggaaaagagaagaaatattcaagaagaatataataaagaacacaac
atcaccccgaaatcaattgttaaagatataagagaagtcatcggaatcttgaaagatgac
aaaaagacgccgaagaaaaaggattctgaactttcagctgaagaactcgaaaacattgta
cgagaacttaaagcgagaatgctcgaagctgctgaacgtttggatttcgaagcggcagca
aatttcagagacgaaatgaagaaattccaaaatcagttggataaaaagaagagataa
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