Ezakiella coagulans: M1R54_08870
Help
Entry
M1R54_08870 CDS
T08131
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecou
Ezakiella coagulans
Pathway
ecou03420
Nucleotide excision repair
ecou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M1R54_08870
03430 Mismatch repair
M1R54_08870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecou03400
]
M1R54_08870
Enzymes [BR:
ecou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M1R54_08870
DNA repair and recombination proteins [BR:
ecou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M1R54_08870
MMR (mismatch excision repair)
Other MMR factors
M1R54_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UQK60610
LinkDB
All DBs
Position
complement(1860497..1862314)
Genome browser
AA seq
605 aa
AA seq
DB search
MQFSESQIKAIKHVDGPCLVLAVPGAGKTTILIQRIIYLVKVHSVLPSQILALTFTRASA
NDMKRRIEELGDDIKVQNIKTIHSLCYDIVALKCEKENKRFRMIEDRRLGSLRFDILNHT
KMRLENIPLTIEEYRNLLSAISNMKTLGSPTSSEDRSMILNNFEEYYNDYENYKNKNDLY
DFDDLLIVADKLLKEDVEIRNYYKNKFKYISLDEAQDTSIIQWSIIKSLLTAKENLFAVA
DDDQSIYRFRGANPEMLMRFGEEFKNAKIIYLETNYRSRFEIVNSASKLIKNNNIRYKKN
ICADKDKSSTVKVRIMKSRKSQYSNIIKTIKDTNGEVALIYRNNLSAVALMDALDRELIS
FELKDHNIDFFNQVVYKDITDILKFFNNPSDIESYSNVYFKLKGYISRKEINSIKHSLGE
TYFEKIYNNFDVPSYKKELIEELEYSRRALIKNFSKNGLDILLNHCGYLDYLNHFKRLNN
RGLEGYMRHFRTLRIISNGCNDIEEFLNRLEDIKNMALRESRSKIKLMSMHASKGLEFDT
VILLDLLNSEIPGEHITKNELEEERRLLYVGMTRAKENLFMYAYKNDGNQEFKISRFLDE
LKSGK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcggaatcacaaataaaagcaattaaacatgtcgatggtccatgtctcgtg
cttgctgttcccggtgccggaaaaacaacgatacttattcagagaattatttatctcgtt
aaagttcatagcgttcttccttcacaaattcttgccttaactttcacacgtgcgtctgca
aacgatatgaaaagaagaattgaagaacttggcgacgacataaaagttcaaaacataaaa
acaattcactcactttgttatgatattgtcgcactcaaatgtgaaaaagaaaataaacgc
ttccgaatgattgaagacagacgactcgggagtcttagatttgatattttaaatcataca
aaaatgcgacttgaaaatatcccgctcacaatagaagaatatcgaaatcttttgagtgca
ataagcaatatgaaaactctaggttctccaacatcttccgaagaccgttcaatgatatta
aacaatttcgaggaatattataacgactacgaaaattataaaaacaagaatgatttgtat
gacttcgacgaccttttgattgttgcggataagcttttaaaagaagatgtcgaaataaga
aactattacaaaaataaattcaaatatatctcccttgacgaagctcaagacacatcaata
attcaatggtctatcataaaaagcctactgactgcaaaggaaaatcttttcgcagttgcg
gatgacgaccaaagcatttatcgttttcgcggtgcgaatcctgaaatgcttatgcgcttc
ggcgaagaatttaaaaatgcaaaaattatttatctcgaaacaaattatcgctcgagattt
gagatcgtaaactctgcatcgaaactcataaaaaacaacaatataagatacaaaaaaaat
atttgtgcagataaagataaatcctctacagtaaaggtgaggataatgaaatctcgcaaa
tcacaatacagtaatattataaaaaccataaaagacacgaatggcgaagttgcattgatt
tatcgaaacaatctttcagcagttgcacttatggatgcacttgatcgagaattgatttca
tttgaactaaaagaccacaatattgactttttcaaccaagttgtatataaagacataact
gatattctaaagttctttaataacccttccgacatagaaagctactcaaatgtatatttc
aaattaaagggttatatctcgagaaaagaaataaattcaatcaagcattcattgggcgaa
acttattttgaaaaaatatacaacaacttcgatgtgccgtcatacaaaaaagaactcatc
gaggagctcgaatattcgagacgtgcgcttatcaaaaatttttcgaaaaatggtctcgac
atattgctgaatcactgtggatatcttgattatctaaaccatttcaaacgtttaaacaac
cgcggcctcgaaggatatatgaggcattttagaacactcagaatcatttcaaacggatgc
aatgatatcgaagaatttttgaatcgccttgaagacataaagaatatggcgttaagagaa
agtagaagtaagataaaactcatgagcatgcatgcatcaaaagggctcgaattcgacacc
gttatacttctcgatcttttaaacagtgagattcccggcgaacatatcactaaaaacgaa
ctcgaagaagaaagacgccttctctatgtcggtatgacacgtgctaaagaaaatttattt
atgtatgcatacaaaaatgacggtaatcaagaatttaaaatttccagatttttagatgaa
ctaaaaagcgggaaataa
DBGET
integrated database retrieval system
