Escherichia coli O6 K15 H31 536 (UPEC): ECP_0936
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Entry
ECP_0936 CDS
T00373
Name
(GenBank) hypothetical protein YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
ecp
Escherichia coli O6:K15:H31 536 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecp01002
]
ECP_0936
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecp01011
]
ECP_0936
Peptidases and inhibitors [BR:
ecp01002
]
Cysteine peptidases
Family C82
ECP_0936
Peptidoglycan biosynthesis and degradation proteins [BR:
ecp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECP_0936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
ABG68951
UniProt:
A0A454A2V5
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All DBs
Position
991605..993452
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMTRDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP
YALSTPPLSVINQWQLALDKGQLPTFVVGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMD
KQTTSRSKPVPVVRAAYDNELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg
gcggggatccagccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatct
caattacccgcaggttacaagccggtttatcttaaccagcttcaactgttgtatgccgca
cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg
gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc
gatcctggtgttaacgggatgacacgcgacgtggtgctctctgatgcgatgatgggctat
ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct
tatgcgctttcaacgccgccgctttcggtgattaaccaatggcagctggcgctggataaa
ggtcaattgccgacgtttgttgtaggattggcaccgcagcatccgcaatatgcggcgatg
catgaatcgttactggccttactcagtgacaccaaaccgtggccccaactgaccggcaaa
gcaacgttgcgcccaggacagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa
cgtacaggcatgttggacgggggaccgaaaattacgctacctggcgatgacacgccaact
gacgcggtagtcagcccatccgctgttactattgaaacagcagaaactaagccgatggac
aagcaaactacgtctcgtagtaaacctgtgcctgtcgttcgtgccgcctacgataatgaa
ctggtggaagccgttaaacgttttcagacatggcaaggattgggagcagatggtgctatt
ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca
ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac
attccggcctattcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtc
attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcccttaacaacgtggtg
gtaaacccgccgtggaacgtaccaccaactctggcacgcaaagatattctgccgaaagtg
cgcaatgatcctgggtatctcgaaagccatggctatacggtgatgcgcggctggaacagc
agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg
ttccgcttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg
ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgat
acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg
ctgttgcaggatgcaggctggaatgacaaacgtatttctgatgcgctgaagcagggcgat
acgcgttacgtcaatattcggcagtcgattccggtgaatctctactatctgacggccttt
gttggtgcagatggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcg
cgatccagctcgcaaattgtatcgaaagcggaacaattaatcaggtaa
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