Escherichia coli O6 K15 H31 536 (UPEC): ECP_1747
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Entry
ECP_1747 CDS
T00373
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecp
Escherichia coli O6:K15:H31 536 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecp03016
]
ECP_1747
Enzymes [BR:
ecp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ECP_1747
Transfer RNA biogenesis [BR:
ecp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECP_1747
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABG69750
UniProt:
A0A454A4S4
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All DBs
Position
complement(1798714..1799829)
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AA seq
371 aa
AA seq
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MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGISDWS
PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE
YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR
LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL
WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQALPEEALPQPMLNLMDMPGYR
KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE
ALHNLLQEYPQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattaccacggacgatgcgctggcttctttgtgtgaagccgtccgtgcctttccggcg
atagccctggatactgaatttgttcgtacgcgcacctattacccgcaactgggtctaatt
caactttttgatggtgagcatctggcgctaattgatcctctcgggatctccgactggtca
ccactgaaagcgatcctgcgcgatccgtccatcacaaaatttctccatgcaggcagtgaa
gatctggaagtgttcctcaatgtctttggcgaattaccacaacccctgattgacacgcaa
atccttgctgccttctgcggacgcccgatgtcatggggtttcgcttccatggtggaagag
tattccggcgttacgctggacaagagtgaatcgcgcaccgactggctggccagaccgctg
accgaacgtcagtgtgaatatgcagcggcggatgtctggtatctgttaccgatcaccgcc
aagcttatggtagaaacggaggcctccggctggctacctgcggcgctggatgaatgccgc
ctgatgcaaatgcgtcgtcaggaagtcgttgcgccggaagacgcctggcgtgatatcacc
aatgcctggcagttacgcacacgccaactggcctgtctgcaactgttagccgactggcga
ttgcgcaaggcgcgagagcgcgatctggcggtgaactttgtcgtgcgtgaagagcatttg
tggtcggtagcgcgttatatgccgggaagtctgggcgaactggacagcctgggcttatcc
ggtagcgaaatccgcttccacggtaaaacgttgctggcgctggtggaaaaagcgcaggca
ttgccagaagaggccttaccgcagccgatgcttaacctgatggacatgccgggttatcgt
aaagcgtttaaagcgattaagtcgctgattactgacgtcagcgaaacgcacaagatcagc
gccgaattgctggcgtcgcgtcggcaaatcaaccaactgctgaactggcactggaaactg
aaaccgcagaacaatttgccggagctgatttccggctggcgtggtgagttgatggcggaa
gcattacacaatttattgcaggaatatccacagtaa
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