Escherichia coli O6 K15 H31 536 (UPEC): ECP_2885
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Entry
ECP_2885 CDS
T00373
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecp
Escherichia coli O6:K15:H31 536 (UPEC)
Pathway
ecp03410
Base excision repair
ecp03430
Mismatch repair
ecp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECP_2885
03430 Mismatch repair
ECP_2885
03440 Homologous recombination
ECP_2885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecp03400
]
ECP_2885
DNA repair and recombination proteins [BR:
ecp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ECP_2885
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ECP_2885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ECP_2885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ABG70869
UniProt:
A0A454A7G3
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All DBs
Position
complement(3055256..3056989)
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AA seq
577 aa
AA seq
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MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaacttcgtcgccgagaagtcgatgaaacggccgacttgcccgct
gaattgcctcccttgctgcgccgtttatatgccagccggggtgtgcgtagcgcgcaggaa
ctggaacgcagtgttaaaggcatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggcacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggttccaaaccgtttcgaagacggttacggcttaagcccggaa
gtagtcgatcaggctcatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggggttgaacacgctcgttcgttgggcattccggttattgttaccgat
caccatttgccaggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aatctggcagaactgctggatctggtagcgttggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccggggattaaagcgctgctggaagtggccaatcgcgatccacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgttggcgtggcgctgttgttgtgtgacaacattggcgaagcgcgtgtgctggcgaat
gaactcgatgcactaaaccaaacacgtaaagagatcgaacagggaatgcaggttgaagcg
ctcactctgtgcgagaagctggaacgtagccgcgacacgctgccaggtgggctggcaatg
tatcaccctgaatggcatcagggcgttgttggcattctggcatcgcgtatcaaagagcgt
tttcaccgtccggttatcgcctttgcgcctgcgggcgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgcgatgcgctggagcggctagacacgctttacccc
ggcatgatgctgaagtttggcggtcatgcgatggcggcgggtttgtcgctggaagaggat
aaattcgaactctttcaacaacggtttggcgaactggttactgagtggctggacccttcg
ctattgcaaggcgaagtggtgtcggacggtccgttaagtccggccgaaatgaccatggaa
gtggcgcagctgctgcgcgatgctggcccgtgggggcagatgttcccggagccgctgttt
gacggtcatttccgtctgctgcaacagcggctggtgggcgagcgtcatttgaaagtcatg
gtcgagccggtcggcggcggtccgctgctggatggtattgcttttaatgtcgataccgcc
ctctggccggataacggcgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
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