Escherichia coli O6 K15 H31 536 (UPEC): ECP_4007
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Entry
ECP_4007 CDS
T00373
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecp
Escherichia coli O6:K15:H31 536 (UPEC)
Pathway
ecp03420
Nucleotide excision repair
ecp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECP_4007
03430 Mismatch repair
ECP_4007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecp03400
]
ECP_4007
Enzymes [BR:
ecp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECP_4007
DNA repair and recombination proteins [BR:
ecp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECP_4007
MMR (mismatch excision repair)
Other MMR factors
ECP_4007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABG71967
UniProt:
A0A454A9R8
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All DBs
Position
4180858..4183020
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggttgatgagcgtggaaaactgctcgccgtattcgattatggcggtg
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcaactgatgggcact
agccagggcggtatgtgggtcggcaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagtgaagaccagcta
cgtctgcttaagcgtttgatcaaggcgatgaatctcgacgagaagcagtggccgccgcgt
caggcaatgtggtacatcaacagccagaaagatgaggggctgcgtccgcatcatattcag
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtgg
cttaacaagccgcatatccttcagcactatcgcgaacggtttaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgttggcgatgacgatcagtcaatctacggctggcgcggagcgcag
gtcgagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgctaacgccctgattgaaaacaat
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctc
tattgcgcttttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctgg
caggacaacggcggggcgctcgctgagtgcgccattctctaccgcagcaacgcccagtcg
cgtgtgctggaagaggcgttattgcaggcgagtatgccgtatcgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaac
cgcaacgacgacgcggcctttgagcgtgtggtgaatacgccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgagatcgccagttaacactctggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggagctgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtgcagttgatgacgctacac
tcggcgaaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcagcgtatgggt
acgccgatggtcgagaacgacagcggctataagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggcgagcatagccgtttgcaggtg
gcattccagggccagggtattaaatggctggtggcggcttacgcccggttggagacggtg
tga
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