Escherichia coli O81 ED1a (commensal): ECED1_0148
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Entry
ECED1_0148 CDS
T00827
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECED1_0148 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecq03019
]
ECED1_0148 (pcnB)
Enzymes [BR:
ecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECED1_0148 (pcnB)
Messenger RNA biogenesis [BR:
ecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECED1_0148 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
CAR06370
UniProt:
B7MP05
LinkDB
All DBs
Position
complement(163730..165148)
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMER
IIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERN
AELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgtactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtgatcccg
cgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgacctgtta
cttggcaaaaagccgaaagattttgacgtgaccaccaacgccacgccagagcaggtgcgc
aaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtgatgttt
ggcccggagattatcgaagttgcgaccttccgtggacatcacgaaggtaacgtcagcgac
cgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttcggctcc
atcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagcgtggca
gattttaccgtccgtgattacgttggcggcatgaaggatctgaaagacggcgttatccgt
ctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctccgcgcggtt
cgttttgccgccaaattgggcatgcgcatcagcccggaaaccgcagaaccgatccctcgc
ctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgcttaaactg
ctacaagcgggctacggttacgaaacctataagctgctgtgtgaatatcatctgttccag
ccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatggaacgc
attattgagcaggtactgaagaataccgatacgcgtatccataacgatatgcgcgtgaac
ccggcgttcctgtttgccgccatgttctggtacccattgctggagacggcacagaagatc
gcccaggaaagcggcctgacctatcacgacgctttcgcactggcgatgaacgacgtgctg
gacgaagcctgccgttcactggcgatcccgaaacggctgaccacgctaacccgcgatatc
tggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgcatggaaactgctggag
catcctaagttccgtgcggcatacgacctgttggccttacgagccgaagttgagcgtaac
gctgaactgcaacgtctggtgaaatggtggggtgagttccaggtttccgcgccaccagac
caaaaagggatgcttaacgaactggatgaagaaccgtcaccgcgtcgtcgtactcgtcgt
ccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga
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