Escherichia coli O81 ED1a (commensal): ECED1_0810
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Entry
ECED1_0810 CDS
T00827
Symbol
ybjK
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecq03000
]
ECED1_0810 (ybjK)
Transcription factors [BR:
ecq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECED1_0810 (ybjK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TetR_C_28
Motif
Other DBs
NCBI-ProteinID:
CAR07015
UniProt:
B7MQU9
LinkDB
All DBs
Position
844433..844969
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AA seq
178 aa
AA seq
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MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIAALAGVPLGSMTYYFSGIDELLLEAF
SRFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK
TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERIAG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcgctaacgatccgcaacggcgagaaaaaattatccaggccacgctggaggcg
gtgaaactttacggaatacatgctgttacacaccgcaaaattgctgcccttgccggggtg
ccgttgggatcgatgacctactatttttcaggaattgatgagttgttgctggaggcgttc
agccgttttactgagatcatgtcccggcaatatcaggcattttttagcgatgttagtgat
gctccaggcgcatgccaggctatcaccgatatgatctacagctcacaggtcgcaacgccg
gataatatggagctgatgtaccagctctacgcgctggctagccgaaaaccgctcttaaaa
acggtaatgcaaaactggatgcagcgcagtcaacaaacgctcgaacaatggtttgaaccc
ggaaccgcccgcgcgcttgatgcgtttattgaggggatgacgctgcattttgtcaccgac
cgtaagccgctatcacgcgaggagattttgaggatggttgagaggattgctgggtag
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