Escherichia coli O81 ED1a (commensal): ECED1_1254
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Entry
ECED1_1254 CDS
T00827
Symbol
ycfQ
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecq03000
]
ECED1_1254 (ycfQ)
Transcription factors [BR:
ecq03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECED1_1254 (ycfQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
HTH_Tnp_1_2
TetR_C_11
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
CAR07455
UniProt:
B7MTP1
LinkDB
All DBs
Position
complement(1254197..1254829)
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AA seq
210 aa
AA seq
DB search
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEF
TNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMI
NNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPTHCDVTHLAEFLNCIIQG
MSISAREGASLEKLMQIARTTLRLWPELLK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgactcaacacaatgtgtaaaaaaaagccgtggccgcccaaaagtgttcgac
agggatgccgcgcttgataaggccatgaaattgttctggcagcacggttatgaagcgact
tctcttgcggacctcgttgaagcgaccggagctaaagcgcccacgctatacgcggaattt
accaacaaagaggggttattccgcgccgtactcgaccgctatatcgatcgttttgccgcc
aagcatgaagcacagctgttttgtgaagagaaaagcgtggagtctgcgctggctgactat
tttgctgccatcgccaactgctttaccagcaaagacactccggctggctgcttcatgatc
aacaactgcaccaccctctccccggattcaggagatatcgccaatacgctgaaatcacgc
catgcgatgcaagagcgcactttgcagcagtttttatgtcaacgacaagcgcgcggggaa
atcccgacccactgtgacgtgacgcatctggcagaattccttaattgtattattcagggg
atgtcgatcagcgcacgcgaaggtgcatcgctggaaaaactgatgcagattgcccgaacg
actttgcgtttatggccggaactgctgaaatag
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