Escherichia coli O81 ED1a (commensal): ECED1_1303
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Entry
ECED1_1303 CDS
T00827
Symbol
ycgF
Name
(GenBank) putative cyclic-di-GMP phosphodiesterase; blue-light sensing protein using FAD (BLUF)
KO
K21973
blue light- and temperature-responsive anti-repressor
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
ECED1_1303 (ycgF)
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Gene cluster
GFIT
Motif
Pfam:
EAL
BLUF
TEX47
Motif
Other DBs
NCBI-ProteinID:
CAR07503
UniProt:
B7MTT9
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Position
complement(1296570..1297781)
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AA seq
403 aa
AA seq
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MLTTLIYRSHIRGDEPVKKIEEMVSIANRRNMRSDVTGILLFNGSHFFQLLEGPEEQVQM
IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT
YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCTLSSNINDHFAFHPIV
DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDEEIYTADLKSKALAFAMAHALKLGDKMIS
INLLPMTLVNKPDAVSFLLDEIKANALVPEQIIVEFTESEVISRFDEFAEAVKSLKAAGI
SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIMKCCTSLEIQVS
AMGVATPEEWMWLESAGIEMFQGDLFSKAKLNGIPSVAWPEKK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccacccttatttatcgtagccatatacgtggcgacgaacctgtcaaaaaaatt
gaagaaatggtttcgatagcaaatcgcaggaacatgcggtctgacgtaacagggatctta
ctgtttaatggttctcattttttccagcttctggaaggtccggaagaacaggttcaaatg
atatatcgggccatatgccaggatccacggcactataatattgttgaactgttgtgcgat
tacgcgcctgctcgccgttttggcaaagcaggaatggaattatttgatttacgcctgcac
gagcgagatgacgttttacaggccgtattcgacaaaggcacatcaaaatttcagctaact
tatgatgacagagcgctacaattttttcgtacttttgtccttgcaactgaacaatcaacc
tatttcgagattcctgctgaagactcctggctttttatcgctgacggatctgataaagaa
cttgattcttgtaccctttcatcaaatataaacgaccactttgcctttcatcctattgtc
gaccctttatcgcggcggataatcgcttttgaagccattgtgcaaaaaaatgaagacagc
ccgtcagctatagcggttgggcagcgtaaagacgaggaaatctacacagcggatctcaaa
agtaaggcgcttgcatttgcgatggcacacgcacttaagctcggtgataaaatgatttca
atcaatctattacctatgaccctggttaacaaacctgacgcagtctcttttttacttgat
gaaataaaggccaatgctctggtacctgaacaaatcatcgttgaatttactgaaagtgaa
gtcatatctcggtttgatgagtttgccgaagcggttaaatcgctaaaggcggccggtatc
agtgtagcaattgatcattttggcgcaggttttgctggtttgttactcctgtcacgcttc
cagcctgacagaattaaaatcagtcaggaattgattaccaatgttcataaaagcggacca
cggcaggcaattattcaggcgatcatgaaatgctgtacatcacttgaaattcaagtctct
gctatgggcgtggcaacaccagaagagtggatgtggcttgaatctgcaggaattgagatg
tttcagggagatctgttttccaaagctaaattgaatggtatcccttcagttgcgtggccg
gagaaaaaataa
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