Escherichia coli O81 ED1a (commensal): ECED1_1496
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Entry
ECED1_1496 CDS
T00827
Symbol
gmr
Name
(GenBank) modulator of Rnase II stability
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq02024
Quorum sensing
ecq02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECED1_1496 (gmr)
02026 Biofilm formation - Escherichia coli
ECED1_1496 (gmr)
Enzymes [BR:
ecq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
ECED1_1496 (gmr)
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
CAR07694
UniProt:
B7MUC8
LinkDB
All DBs
Position
complement(1465080..1467065)
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AA seq
661 aa
AA seq
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MKTVRESATLYNFLGSHNPYWRLTESSDVLRFSTTEITEPDRILQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWGGNASAWHDTSAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG
NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI
LSCLEHDQVLARPGGDEFLVLASNTSQSALEALASRILTRLRLPFRIGLIEVYTSCSVGI
SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND
ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttagggagtccgcaacgttgtacaactttctcggatcgcacaatccatac
tggcggttgacggaaagcagcgatgttttgcgcttttctaccaccgaaatcacagaaccc
gatcgtattttgcaactatctgccgaacaggctgctcgcatcagggaaatgacggtcatc
acctccagcctgatgatgagtctgaccgtcgatgaaagcgatctttctgtgcatctggta
ggacgaaaaatcaataaacgagaatggggaggcaacgcgtctgcatggcatgacacatcg
gcggttgctcgtgatttatcacatgggctttcctttgctgagcaggtagtttctgaagca
cattccgcaatagtgattctcgacagccgggggaatatccagcgcttcaatcggttatgt
gaagattacacagggttgaaagaacacgacgtcattgggcaaagcgtgtttaaactgttt
atgagtcgtcgtgaagctgcggcatccaggcgcaataaccgtgtattttttcgaagcggc
aatgcatatgaagtcgaactatggataccaacacgtaaaggccagcggctgtttctgttt
cgcaataaatttgtccacagcggcagtggcaaaaacgagatttttttaatctgttccggc
accgacattaccgaagagcgccgcgctcaggagcgactgcgtattctggcaaataccgac
agtatcaccggactgccgaatcgtaacgcgatgcaggagttaatcgatcacgctattaat
caggcagataacaataaagttggggttgtgtatcttgatttggataattttaaaaaggtc
aacgacgcctatgggcatttgtttggtgaccagttattacgcgacgtgtcattggctatt
ttaagctgtctcgaacatgaccaggtgttggcgcgtccaggtggcgatgagtttctggta
ctggcatccaatacctcacaaagcgcgctggaagcattggcatcacgaattttgacccgc
ttacgactcccctttcgcattggtttaattgaagtttataccagctgttcagtaggtatt
tcactctctcccgaacatggttcggacagcgcggctattattcgtcacgccgacacagca
atgtacacagcgaaggaaggcggacgaggacaattttgcgtttttaccccagaaatgaat
cagcgggtatttgaatatctctggctggataccaacttgcgtaaagcactggaaaacgat
cagttggttattcactatcaaccgaaaatcacctggcgtggcgaagtgcgcagtctggaa
gcactagtacgttggcagtcacctgaacgtgggttgattccaccgttggacttcatttcc
tacgccgaagaatcagggctaattgtgcctttaggccgttgggtgattctcgatgtcgta
cgccaggtagcgaagtggcgggataaaggcattaacctgcgagtggcggtaaatatttct
gcacgtcagctcgccgatcaaaccattttcaccgccctgaaacaggttctccaggaactc
aattttgaatactgccctatagatgttgaactgacggagagctgcctgattgagaatgat
gaactggcactgtctgttattcaacaatttagccgattaggtgcgcaagttcatctggac
gattttggtaccggctactcttcactttcgcaactggcgcgctttccgatcgatgccatc
aaacttgaccaggtttttgttcgggatattcacaaacagcctgtctcgcaatcactggtc
cgggcgatcgtcgctgtggcccaggcattgaatcttcaggtgatcgccgaaggtgtagaa
agtgcaaaggaagatgcttttttaaccaagaacgggatcaatgagcgacaaggatttttg
tttgccaaaccgatgcccgccgttgccttcgaacgctggtataaacgctatctgaagcgc
acataa
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