Escherichia coli O81 ED1a (commensal): ECED1_1596
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Entry
ECED1_1596 CDS
T00827
Symbol
ydcU
Name
(GenBank) putative spermidine/putrescine transporter subunit; permease of ABC superfamily transporter
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECED1_1596 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecq02000
]
ECED1_1596 (ydcU)
Transporters [BR:
ecq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECED1_1596 (ydcU)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
CAR07794
UniProt:
B7MUM8
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All DBs
Position
1578088..1579029
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaacgtattgcaatcaccttcacgtccaggtctgggtaaggtgtccggtttc
ttctggcgtaatccggggctggggctgtttttgctgctgcttggcccgctaatgtggttt
ggcattgtctatttcggctcgctgctgacgctgttgtggcagggcttttatacctttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaatatccgtgcgctgtttaat
ccggcgaattacgacatcattctccgcacgctgaccatggctgtggcagtcactatcgcc
agcgccattctggcttttccaatggcgtggtatatggcgcgctataccagcggaaaaatg
aaagcgtttttttatatcgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgctggcaaaagatggcgtggcgcagtggtttttacaacatctg
gggctggaaccactgctgactgcgttcctcacgctaccggcggtgggaggtaatacgctg
tcaacttccgggctggggcgctttctggtgtttctctatatctggttgccgttcatgatc
ctcccggtgcaggcggcgcttgagcgtttgccgccgtcattgttgcaggcgtcggctgat
cttggcgcacgtccacgacaaacctttcgctatgtggtgctgccgctggcaatcccgggt
attgccgctggctctatctttaccttctcactcacgctgggcgattttattgtcccgcag
ctggttggccctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattgttcttatcgcactgtac
ctggcgttcgtgaaacgtctgggagcgttcgatgcactctga
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