Escherichia coli O81 ED1a (commensal): ECED1_2986
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Entry
ECED1_2986 CDS
T00827
Symbol
yfhD
Name
(GenBank) putative transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ecq01011
]
ECED1_2986 (yfhD)
Enzymes [BR:
ecq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ECED1_2986 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ecq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ECED1_2986 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
CAR09013
UniProt:
B7MY47
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All DBs
Position
2952965..2954383
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AA seq
472 aa
AA seq
DB search
MSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLA
AGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQT
LKDTKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDE
QPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDA
VLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDR
TDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPD
SWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAA
MQLAQDYPAVSPTKLGKEKFPFLSFLSQSSSNYLTHTPSLLFSRKGSEEKQN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccattcatactcccctgacttataacgaaatcaacgggaaaccttttggcctg
gattacgaactggcgaaacagtttgccgattacctcggtgtaaaactgaaagtgaccgtg
cggcagaatatcagccagctgtttgacgacctcgataatggtaacgccgacctgctggcg
gcaggactggtctataacagtgagcgggtaaaaaattatcagcctggtcctacctattat
tccgtgtcacaacaactggtttataaagtcggtcagtatcgcccacgtacgctgggcaac
ctgacggcggagcaactcaccgttgcaccgggtcacgtggtggttaacgatctccagacc
ctgaaagacacaaaattcccggaattaagctggaaggtagacgacaaaaaaggctctgcg
gaattaatggaagatgtcatcgaaggaaaactcgattacaccattgctgattctgtcgcc
atcagcctgtttcagcgcgttcacccggaactcgccgtagcgctcgatatcaccgatgaa
caaccggtgacctggtttagcccgttagatggcgataataccctttccgccgccctgctc
gacttcttcaacgaaatgaatgaagacggtacactggcacgcattgaagagaaatacctg
gggcatggcgatgattttgattacgtcgatacgcgcacatttttacgcgccgtcgatgcg
gtactgccgcagttaaagcccctgtttgagaaatacgccgaagaaattgactggcgtttg
ctggccgctattgcttatcaggaatcgcactgggatgctcaggccacttcaccgacgggt
gtgcgcggcatgatgatgttaaccaaaaacaccgcgcaaagcctcggcattacggatcgt
accgatgccgaacagagcatcagcggcggcgtgcgttatttgcaggatatgatgagtaaa
gtgccggaaagtgtgccggagaacgaacggatctggtttgccctcgccgcgtacaatatg
ggctatgcgcatatgctggatgcccgcgccctgacggcaaaaaccaaaggtaatcctgac
agttgggctgacgtaaaacagcgtctgcctttacttagccagaaaccctattacagcaag
ctgacttacggctacgctcgtgggcatgaagcctacgcttatgtcgaaaatattcgtaaa
tatcagattagcctggtgggttatctgcaggagaaagagaagcaggctacagaagcggcg
atgcaactggcgcaggattatccggcggtatcgcctacgaagctgggcaaagagaaattt
ccttttctctcgtttctttcccagtcgtcatcaaactatttgacccacactccctctctg
ctgttttccagaaaagggagtgaagagaaacaaaattaa
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