Escherichia coli O81 ED1a (commensal): ECED1_3049
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Entry
ECED1_3049 CDS
T00827
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq02024
Quorum sensing
ecq03060
Protein export
ecq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ECED1_3049 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ECED1_3049 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECED1_3049 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecq02044
]
ECED1_3049 (ffh)
Enzymes [BR:
ecq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ECED1_3049 (ffh)
Secretion system [BR:
ecq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ECED1_3049 (ffh)
Eukaryotic Sec-SRP protein
ECED1_3049 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_16
AAA_24
Helicase_RecD
AAA_33
AIP3
APS_kinase
T2SSE
GlnD_UR_UTase
AAA_14
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
CAR09216
UniProt:
B7MYP9
LinkDB
All DBs
Position
complement(3006575..3007936)
Genome browser
AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgcctcactgaagacaacgtaaaagatacgctgcgcgaagtgcgcatggcgctgctggag
gcggacgtcgctctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaataagagcctgacgccggggcaggagttcgtcaaaattgtccgtaac
gaactggttgcggcgatgggcgaagagaaccagaccctgaacctggctgcgcaaccgcct
gcggtcgtgctgatggcgggcctgcaaggtgccggtaaaacaaccagcgttggtaaactc
ggtaagttcctgcgcgagaagcacaagaagaaagtactggtggtttctgccgacgtctat
cgcccggcggcaatcaaacagcttgagacgctggcagagcaggtgggcgttgatttcttc
ccttctgatgttggtcagaagccggtagatatcgttaacgcggcgctgaaagaagccaaa
ctgaaattctacgacgtgctgctggtggatactgccggtcgtctgcacgttgacgaagcg
atgatggacgagatcaaacaagtccatgcgtcgattaatccggttgaaaccctgtttgtg
gtcgatgccatgaccggtcaggatgcggccaatacggcaaaagcattcaatgaagcgtta
ccgcttaccggtgtagtgttgaccaaagtggacggcgatgcccgcggcggtgcggcgctc
tctattcgtcacatcactggcaaaccgatcaagttcctcggtgttggcgagaaaaccgag
gcgctggagccattccatccggaccgtattgcctcccgtattcttggcatgggcgacgtg
ctgtcgctgatcgaagatatcgaaagcaaggttgaccgcgcgcaggcagagaaattagcc
agcaagctgaaaaaaggcgacggcttcgatctcaacgactttcttgagcagctgcgccag
atgaaaaatatgggcggcatggctagcctgatgggcaagttgccgggcatggggcagatc
ccggataacgtcaagtcgcagatggacgataaagtgctggtgcgtatggaagccatcatc
aactcgatgacgatgaaagagcgcgctaagccagaaatcatcaaaggttcgcgtaaacgc
cgtatcgctgccggttgcggtatgcaggtgcaggacgttaaccgtcttctgaaacagttc
gacgacatgcagcgcatgatgaagaaaatgaaaaagggcgggatggcgaagatgatgaga
agcatgaaagggatgatgccgccgggatttcctggtcgctaa
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