Escherichia coli O81 ED1a (commensal): ECED1_3201
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Entry
ECED1_3201 CDS
T00827
Symbol
truD
Name
(GenBank) pseudoruidine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecq03016
]
ECED1_3201 (truD)
Enzymes [BR:
ecq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ECED1_3201 (truD)
Transfer RNA biogenesis [BR:
ecq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECED1_3201 (truD)
Prokaryotic type
ECED1_3201 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAR09363
UniProt:
B7MZ46
LinkDB
All DBs
Position
complement(3135472..3136521)
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AA seq
349 aa
AA seq
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MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ
TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEE
LAELQRRVNDKVLMITAVLPGSGEWGTQREALAFEQAAVAEETELQTLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgataatctcacttacctccacggtaaaccgcaaggtaccgggctgctg
aaagccaatccggaagactttgtggtggtggaagatttgggctttgagcctgatggtgaa
ggtgagcatattctggttagaatccttaaaaacggctgcaatacccgttttgtggcggat
gcactggcgaaattcctgaaaattcatgcccgtgaagtcagcttcgctgggcaaaaagat
aaacatgctgttacggaacagtggttatgcgctcgcgtgccgggcaaagagatgcccgat
ctgagcgcctttcaactggaaggctgccaggtgctggagtatgcgcggcacaagcgcaag
ctgcgtttaggggcgctgaaaggtaacgcctttaccctggtactacgcgaagtgagcaat
cgcgatgacgttgaacaacgtctgatcgatatttgcgtaaaaggtgtaccgaactacttc
ggtgctcaacgttttgggattggcggtagcaacttgcagggtgcgctgcgctgggcgcaa
accaatactccggtgcgcgatcgcaataaacggagtttttggttgtcggcagcccgcagt
gcgttgtttaatcagattgttgctgaacgcctcaaaaaagcagacgttaatcaagttgtt
gacggcgatgcgctacaattagccggacgtggtagctggtttgtcgcaaccaccgaagaa
ctggcggaattacagcgtcgcgtcaacgataaagtgctgatgataaccgccgtattgccg
ggcagtggcgagtggggaactcagcgtgaagcgctggcattcgaacaagcagctgtcgcc
gaagaaactgaattacaaaccttactggtgcgcgaaaaagttgaagccgcgcgcagagcg
atgctgctgtatccgcaacaattaagctggaactggtgggatgatgtcaccgtagaaatc
cgtttctggcttccggcgggaagttttgcaaccagcgttgtcagggaacttatcaacaca
acaggtgattatgcgcatattgctgagtaa
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