Escherichia coli O81 ED1a (commensal): ECED1_3349
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Entry
ECED1_3349 CDS
T00827
Symbol
lysS
Name
(GenBank) lysine tRNA synthetase, constitutive
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ECED1_3349 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecq01007
]
ECED1_3349 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecq03016
]
ECED1_3349 (lysS)
Enzymes [BR:
ecq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ECED1_3349 (lysS)
Amino acid related enzymes [BR:
ecq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ECED1_3349 (lysS)
Transfer RNA biogenesis [BR:
ecq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ECED1_3349 (lysS)
Prokaryotic type
Other AARSs
ECED1_3349 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CAR09360
UniProt:
B7MZ43
LinkDB
All DBs
Position
complement(3299169..3300686)
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AA seq
505 aa
AA seq
DB search
MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE
LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES
RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI
HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacacgcacagggcgctgacgcggtagtcgatcttaacaatgaactgaaa
acgcgtcgtgagaagctggcgaacctgcgtgagcaggggattgccttcccgaacgatttc
cgtcgcgatcatacctctgaccaattgcacgcagaattcgacggtaaagagaacgaagaa
ctggaagcgctgaacatcgaagtcgccgttgctggccgcatgatgacccgtcgtattatg
ggtaaagcgtctttcgttactctgcaggacgttggcggtcgcattcagttgtacgttgcc
cgtgacgatctgccggaaggcgtttacaacgagcagttcaaaaaatgggacctcggcgat
atcctcggcgcgaaaggtaaactgttcaaaaccaaaaccggcgaactgtctatccactgt
accgagctgcgtctgctgaccaaagcactgcgtccgctgccggataaattccacggcttg
caggatcaggaagcgcgctatcgtcagcgttatctggatctcatctctaacgatgaatcc
cgcaacacctttaaagtgcgctcgcagatcctctctggtattcgccagttcatggtgaat
cgcggctttatggaagttgaaacgccgatgatgcaggtgatccctggcggtgccgctgcg
cgtccgtttatcactcaccataacgcgctggatctcgacatgtacctgcgtatcgcgccg
gaactgtacctcaagcgtctggtggtcggtggcttcgagcgtgtattcgaaatcaaccgt
aacttccgtaacgaaggtatttccgtacgtcataacccagagttcaccatgatggaactc
tatatggcttacgcagattacaaagatctgatcgagctgaccgaatcgctgttccgtact
ctggcacaggatattctcggtaagacggaagtgacctacggcgacgtaacgctggacttc
ggtaaaccgttcgaaaaactgaccatgcgtgaagcgatcaagaaatatcgcccggaaact
gacatggcggatctggacaacttcgactctgcgaaagcgattgctgaatctatcggcatc
cacgttgagaagagttggggtctgggccgtatcgttaccgagatcttcgaagaagtggca
gaagctcatctgatccagccgaccttcattactgaatatccggcagaagtttctcctctg
gcgcgtcgtaacgacgttaacccggaaatcacagaccgctttgagttcttcattggaggg
cgtgaaatcggtaacggctttagcgagctgaatgacgcggaagatcaggcgcagcgcttc
ctggatcaggttgccgcgaaagatgcaggtgacgacgaagcgatgttctacgacgaagat
tatgtcaccgcactggaacatggcttaccgccgacagcaggtctgggaattggtatcgac
cgtatggtaatgctgttcaccaacagccataccatccgcgacgttattctgttcccggcg
atgcgtccggtaaaataa
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