Escherichia coli O81 ED1a (commensal): ECED1_3409
Help
Entry
ECED1_3409 CDS
T00827
Symbol
yggJ
Name
(GenBank) conserved hypothetical protein
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecq03009
]
ECED1_3409 (yggJ)
Enzymes [BR:
ecq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
ECED1_3409 (yggJ)
Ribosome biogenesis [BR:
ecq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ECED1_3409 (yggJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
BamI_lipocalin
Helicase_IV_N
Motif
Other DBs
NCBI-ProteinID:
CAR09563
LinkDB
All DBs
Position
3355671..3356402
Genome browser
AA seq
243 aa
AA seq
DB search
MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK
SVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD
SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN
TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcccccgcatttatcatcctgaaccactgaccagccattctcacatcgcgctt
tgcgaagatgccgccaaccatatcgggcgcgtactgcgtatggggccgggacaggcgctg
caattgtttgacggcagcaaccaggtctttgacgccgaaattaccagcgccagcaaaaaa
agcgtggaagtgaaggtgctggaaggccagatcgacgatcgcgaatctccgctgcatatt
cacctcggtcaggtgatgtcgcgtggtgaaaaaatggaatttactatccagaaatcgatc
gaactcggtgtaagcctcattacgccacttttttctgagcgctgcggcgttaaactggat
agtgaacgtctgaacaagaagctccagcagtggcagaagattgcaattgctgcctgtgag
cagtgtggccgtaaccgggtgccggaaatccgtccagcgatggatctggaagcctggtgt
gcagagcaggatgaaggactgaaactgaatcttcacccgcgcgccagtaacagcatcaat
acgttgccgttaccggtcgaacgcgtccgcctgctgattggcccggaaggcggtttatcg
gcagatgaaattgccatgactgcccgctatcaatttactgatatcctgttgggacctcgc
gttttgcgtactgagacaactgcgctcaccgccattaccgcgctacaagtgcgttttggc
gatttgggctaa
DBGET
integrated database retrieval system
