Escherichia coli O81 ED1a (commensal): ECED1_3896
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Entry
ECED1_3896 CDS
T00827
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecq03019
]
ECED1_3896 (rng)
03009 Ribosome biogenesis [BR:
ecq03009
]
ECED1_3896 (rng)
Messenger RNA biogenesis [BR:
ecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECED1_3896 (rng)
Ribosome biogenesis [BR:
ecq03009
]
Prokaryotic type
rRNA processing factors
ECED1_3896 (rng)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CAR09899
UniProt:
B7N0N1
LinkDB
All DBs
Position
complement(3828578..3830047)
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA
ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE
ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttggtaaacgtaacgccttcggaaacgcgagtggcgtatattgat
ggcggtattctgcaggaaattcatattgaacgtgaggcgcgacgcggaatagtaggcaat
atctacaagggtcgtgtaagtcgtgtacttccgggtatgcaggcggcttttgtagatatt
gggctggataaagccgcgtttcttcatgcatctgacatcatgccgcacactgaatgtgtg
gcgggtgaagaacaaaagcaattcacggtgcgcgacatctcggaactggtccgtcagggg
caagatctgatggtgcaggtggtgaaagatccgcttggcactaaaggtgcgcgcctgacc
accgatatcacgctaccttctcgctatctggtgtttatgccaggggcttctcacgttggg
gtatcccaacgaattgaaagcgaatcagaacgtgaacgcctgaaaaaagtggtcgcagag
tattgcgacgagcagggcgggtttatcatccgtactgcagcggaaggggttggcgaggct
gaactggcctccgatgccgcttatctgaaacgcgtctggaccaaagtgatggagcgtaaa
aaacgcccgcagacccgttatcagctgtacggagaactggcgctggcgcagcgtgttctg
cgtgatttcgccgacgccgaactcgaccgcattcgcgttgactcacgcctgacttacgaa
gcattgctggagtttacctcggagtacattcccgagatgaccagcaagctggagcattac
accggacgccagccgattttcgatctctttgatgtcgaaaacgaaattcagcgagcgctg
gaacgcaaagtagaactgaaatccggtggttatctgattatcgaccagaccgaagcgatg
accaccgtggacatcaataccggagcgtttgtcggtcatcgcaatctggacgacaccatt
ttcaataccaatattgaagcgacgcaggctatcgctcgccagttacggttgcgcaatctg
ggcgggattatcattattgatttcatcgatatgaataatgaagatcaccgtcgccgcgtg
ctgcactcgctggagcaggcgctgagcaaagatcgggtgaaaaccagcgttaatggtttt
tcggcgctggggctggtggagatgacgcgtaaacgcacccgcgaaagcattgagcacgta
ctgtgtaacgaatgcccaacctgccacggtcgcggaacggtgaaaaccgtggaaacggta
tgctatgaaatcatgcgcgagattgttcgtgtccaccatgcttacgactccgaccgtttc
ctggtctatgcttctccggcagtagccgaagccttgaaaggcgaagagtcacactcgctg
gcggaagtggaaattttcgttggcaaacaggttaaagtacaaattgaaccgctctataac
caggagcagtttgacgtcgtaatgatgtaa
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