Escherichia coli O81 ED1a (commensal): ECED1_3946
Help
Entry
ECED1_3946 CDS
T00827
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecq03009
]
ECED1_3946 (yrdC)
03016 Transfer RNA biogenesis [BR:
ecq03016
]
ECED1_3946 (yrdC)
Enzymes [BR:
ecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECED1_3946 (yrdC)
Ribosome biogenesis [BR:
ecq03009
]
Prokaryotic type
Other maturation factors
ECED1_3946 (yrdC)
Transfer RNA biogenesis [BR:
ecq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECED1_3946 (yrdC)
Prokaryotic type
ECED1_3946 (yrdC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CAR10085
LinkDB
All DBs
Position
complement(3872222..3872794)
Genome browser
AA seq
190 aa
AA seq
DB search
MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKRRPVDKGLIL
IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaggagacgctatcgcagctgcgatagatgtcctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgtcgggtgcgatcctgatagcgaa
acagcagtgatgagactgttggagttaaaacggcgtccggttgataaggggctgatttta
atcgcggcaaattacgagcagcttaaaccctatattgatgacaccatgctgactgacgcg
cagcgtgaaaccattttttcccgctggccaggtcctgtcacctttgtctttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgct
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
DBGET
integrated database retrieval system
