Escherichia coli O81 ED1a (commensal): ECED1_4262
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Entry
ECED1_4262 CDS
T00827
Symbol
yiaJ
Name
(GenBank) DNA-binding transcriptional repressor
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecq03000
]
ECED1_4262 (yiaJ)
Transcription factors [BR:
ecq03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ECED1_4262 (yiaJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
TrmB
HTH_24
HTH_36
Rrf2
DUF7406
Motif
Other DBs
NCBI-ProteinID:
CAR10250
LinkDB
All DBs
Position
complement(4182820..4183668)
Genome browser
AA seq
282 aa
AA seq
DB search
MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH
RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN
FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQ
HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSI
SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDQGAIT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaagtgatgggaaaaaaagagaacgagatggcgcaggaaaaagagcgccca
gccggaagccagagtctgtttcgtgggttgatgctgattgagattttgagcaactatcca
aacggttgtccgttggcgcatctttcggagctggctggtttaaataagagtaccgtccat
cgcttattgcagggattacagtcctgcggctatgtgaccaccgcgcccgccgcagggagt
tatcgcctgaccaccaaatttattgccgtcgggcagaaggcgctatcttcgctgaatatc
attcatatcgccgctccgcatcttgaggctctgaacatcgccactggtgaaactattaac
ttctccagccgcgaagacgatcacgctattttgatttataagctggaacccacaaccggg
atgctgcgaacccgtgcctatataggccagcatatgccgctctactgttccgcaatgggc
aagatctacatggcgtttggtcacccggactacgtgaagtcatactgggaaagccatcag
catgagatccagccgttaacccgcaataccattaccgagctgcccgcgatgttcgacgaa
ctggcgcacattcgtgaaagtggagcggcgatggacagagaagaaaacgaactcggcgtc
tcctgtattgctgttccggtgtttgatattcatgggcgggtgccgtacgccgtgtcgatt
tcgctttcgacatcacgtctgaaacaggtgggagagaaaaatctcctgaaaccacttcgt
gaaaccgcgcaggctatttctaatgaactgggatttactgtcagggacgaccagggcgcg
attacataa
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