Escherichia coli O81 ED1a (commensal): ECED1_4333
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Entry
ECED1_4333 CDS
T00827
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECED1_4333 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecq03021
]
ECED1_4333 (rpoZ)
03400 DNA repair and recombination proteins [BR:
ecq03400
]
ECED1_4333 (rpoZ)
Enzymes [BR:
ecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECED1_4333 (rpoZ)
Transcription machinery [BR:
ecq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECED1_4333 (rpoZ)
DNA repair and recombination proteins [BR:
ecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECED1_4333 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAV17994
UniProt:
B7N2X2
LinkDB
All DBs
Position
4255188..4255463
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctagta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccg
gaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctattgctgaaggtcgtcgttaa
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