Escherichia coli O81 ED1a (commensal): ECED1_4398
Help
Entry
ECED1_4398 CDS
T00827
Symbol
trmE
Name
(GenBank) GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecq03016
]
ECED1_4398 (trmE)
Transfer RNA biogenesis [BR:
ecq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECED1_4398 (trmE)
Prokaryotic type
Methyltransferases
ECED1_4398 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
AIG1
ABC_tran
Roc
Arf
AAA_28
SRPRB
Gtr1_RagA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CAR10382
UniProt:
B7N211
LinkDB
All DBs
Position
4324338..4325702
Genome browser
AA seq
454 aa
AA seq
DB search
MSDNDTIVAQATPPGRGGVGILRISGLKAREVAETVLGKLPKPRYADYLPFKDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR
TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA
EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatgacactatcgtagcccaggccacgcctccgggacgtggcggcgttggc
atcctgcgcatctccggcctcaaagcccgtgaagttgccgaaaccgtgctgggtaaactg
cctaagccacgctacgccgattatcttccgtttaaagacgccgatggcagcgtgctcgat
caggggattgcgctatggttccctggcccgaactcgttcaccggcgaagatgtgctggaa
ctgcaaggtcatggcggtcctgtgatcctcgacctgctgttaaaacgcattctgaccatt
cccggcctgcggattgcccgccctggtgagttttccgaacgcgcatttctgaacgataaa
ctcgacttagcccaggccgaggcgattgcggatcttatcgacgccagctcggaacaggcg
gcccgttcggcgctaaactcgctgcaaggcgcgttctccgcacgggtcaaccatctggtg
gaagccctcacccacttgcgcatttacgtcgaagcggcaattgatttcccggatgaagag
atcgatttcctctccgacggcaaaattgaagcccagctcaatgacgtaattgccgatctc
gacgcggtacgcgccgaagctcgtcagggtagtttgttgcgcgaagggatgaaagtggtg
attgccggacgtcctaacgccggtaaatcgagcctgctgaacgcgctggcgggccgtgaa
gcagcaatcgtaaccgatatcgccggaaccacgcgtgacgtgctgcgtgagcatatccac
attgacggaatgccgttgcatatcatcgataccgccgggctacgtgaagccagtgacgaa
gttgaacgtattggtatcgagcgcgcatggcaggaaattgaacaggcagaccgcgtgctg
tttatggtcgatggcaccacgacagacgccgttgatccggcagagatctggccggaattt
atcgcccgtctgccagcgaaactgccgatcaccgtggtgcgcaataaagccgatatcacc
ggcgaaacgttggggatgagcgaagtgaacggtcacgcgttaattcgtctttcggcgcgg
actggcgaaggcgtggatgtgctgcgtaaccatctcaaacagagcatgggctttgacacc
aatatggaaggcggcttcctggcgcgtcgtcgtcacctacaggcgctggaacaggcggca
gagcatttgcagcaaggtaaagcgcaactgttaggtgcctgggcgggtgaactgctggcg
gaagagttgcgcctggcgcagcagaacttaagcgagatcaccggggaatttacttcagac
gacctactggggcggattttctccagcttctgtatcggtaagtaa
DBGET
integrated database retrieval system
