Escherichia coli O81 ED1a (commensal): ECED1_4494
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Entry
ECED1_4494 CDS
T00827
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq00300
Lysine biosynthesis
ecq00470
D-Amino acid metabolism
ecq01100
Metabolic pathways
ecq01110
Biosynthesis of secondary metabolites
ecq01120
Microbial metabolism in diverse environments
ecq01230
Biosynthesis of amino acids
Module
ecq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECED1_4494 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECED1_4494 (dapF)
Enzymes [BR:
ecq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECED1_4494 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CAR10613
UniProt:
B7MR29
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Position
4430665..4431489
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNTDGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE
PNFEPSAVPFRANKVEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE
SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcaccggagctgattcgtcgcctggctgatcggcacctgggggta
gggtttgaccaactgctggtggttgagccgccgtatgatcctgaactggattttcactat
cgcattttcaatactgatggcagtgaagtggcgcagtgcggcaacggagcacgctgcttt
gcccgttttgtgcgtctgaaagggctgaccaataagcgcgatatccgcgtcagcaccgcc
aacgggcggatggttcttaccgtcaccgatgatgatctggttcgcgtaaacatgggcgag
cccaacttcgaaccttccgctgtgccgtttcgcgctaacaaagtggaaaagacctatatt
atgcgcgccgccgagcagacaatcttatgtggcgtggtgtcgatgggaaatccgcactgc
gtgattcaggtcgatgatgtcgataccgcggcggtagaaacgcttggtcctgttctggaa
agccacgagcgttttccggagcgcgccaatatcggttttatgcaagtggttaagcgcgag
catattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagcggc
gcatgtgcggcggtggcggtagggattcagcaaggtttgctggccgaagaagtacgcgtg
gaactccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatatatg
actggcccggcggtacatgtctacgacggatttattcatctatga
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