Escherichia coli O81 ED1a (commensal): ECED1_4507
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Entry
ECED1_4507 CDS
T00827
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECED1_4507 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecq03019
]
ECED1_4507 (recQ)
03400 DNA repair and recombination proteins [BR:
ecq03400
]
ECED1_4507 (recQ)
Enzymes [BR:
ecq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECED1_4507 (recQ)
Messenger RNA biogenesis [BR:
ecq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECED1_4507 (recQ)
DNA repair and recombination proteins [BR:
ecq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECED1_4507 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
CAR10626
UniProt:
B7MR42
LinkDB
All DBs
Position
4443428..4445257
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQISLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVVLKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaagaaacc
tttggctaccaacagtttcgccccggccaggaagagattatcgacaccgtactttccggt
cgcgattgcctggtcgtcatgcccactggtggcggaaaatccctttgctatcaaatccct
gccttattgctaaacggccttaccgtggttgtctcaccgctgatttcgttgatgaaagat
caggtagatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacgcaaacc
cgcgagcagcagcttgaagtgatgacaggctgtcgcaccgggcaaatcagcctgctttat
atcgcgccggaacgcctgatgctggataactttcttgagcatctggcgcactggaatccg
gtgttattagccgttgatgaagcgcactgtatctcccaatggggtcacgatttccgcccg
gaatacgctgccctcggtcagctgcgtcagcgttttccgacgctcccgtttatggcgctg
actgccacagccgatgacaccacgcgccaggatatcgtgcgcctgctggggctgaacgat
ccgctgattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatggagaaa
ttcaaaccgctcgatcagttgatgcgttatgtacaggaacaacgcggtaagtcggggatt
atttactgtaatagtcgtgcgaaagtagaagacaccgctgcgcgcctgcaaagcaaggga
attagcgcggcggcctatcatgccgggctggaaaataatgttcgcgctgatgtgcaggaa
aaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatgggcatc
aacaagcctaacgttcgcttcgtggtgcattttgatattccgcgcaatatcgaatcctat
tatcaggaaactggacgcgccgggcgtgatggcctgcccgcggaagcgatgctgttttac
gatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcaggggcagttg
caggatatcgaacgtcataaactcaatgcgatgggcgcgtttgccgaagcgcaaacttgt
cgtcgtttggtattgctgaactattttggcgaagggcgtcaggagccgtgcgggaactgc
gatatctgcctcgatccgccaaaacagtacgatggttcaaccgatgcgcagattgccctt
tccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtgattcgc
ggtgctaataatcagcgtatccgcgactatggtcatgacaaactgaaagtctatggcatg
ggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcacctcggc
ctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggctgcgcgtccg
gtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggtgctcaaaccg
aaagcgatgcagaaatcgttcggcggcaactatgatcgtaaactgttcgccaaattacgc
aaactgcgtaaatcgattgccgatgaaagcaatgtcccgccgtacgtggtgtttaacgac
gcaaccttgattgagatggcggagcagatgccgatcaccgccagcgaaatgctcagcgtt
aacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctgattcgt
gcgcatgtcgatggtgacgacgaagagtag
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