Escherichia coli O81 ED1a (commensal): ECED1_4564
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Entry
ECED1_4564 CDS
T00827
Symbol
polA
Name
(GenBank) fused DNA polymerase I 5'->3' exonuclease; 3'->5' polymerase; 3'->5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03030
DNA replication
ecq03410
Base excision repair
ecq03420
Nucleotide excision repair
ecq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECED1_4564 (polA)
03410 Base excision repair
ECED1_4564 (polA)
03420 Nucleotide excision repair
ECED1_4564 (polA)
03440 Homologous recombination
ECED1_4564 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecq03032
]
ECED1_4564 (polA)
03400 DNA repair and recombination proteins [BR:
ecq03400
]
ECED1_4564 (polA)
Enzymes [BR:
ecq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ECED1_4564 (polA)
DNA replication proteins [BR:
ecq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ECED1_4564 (polA)
DNA repair and recombination proteins [BR:
ecq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ECED1_4564 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECED1_4564 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAV18034
UniProt:
B7N2Y7
LinkDB
All DBs
Position
4503668..4506454
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVQPPAAEELLGLFKKYEFKRWTADVEAGKWLQAK
GAKPAARPQETSVADEAPEVTATVISYDNYVTILDEETLKEWIAKLEKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN
LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI
ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI
HQLMENCTRLDVPLLVEVGRGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccccaaaatccacttatccttgtagatggttcatcttacctttatcgc
gcatatcacgcgtttcccccgctgactaacagcgcaggcgagccgaccggtgcgatgtat
ggtgtcctcaacatgctgcgcagtctgatcatgcaatataaaccgacgcatgcagcggtg
gtctttgacgccaagggaaaaacctttcgtgatgaactgtttgaacattacaaatcacat
cgcccgccaatgccggacgatctgcgagcacaaatcgaacctctgcacgcgatggttaaa
gcgatgggactgccgctgctggcggtttctggcgtagaagcggacgacgttatcggtact
ctggcgcgcgaagccgaaaaagccgggcgtccggtgctgatcagcactggcgataaagat
atggcgcagctggtgacgccaaatattacgcttatcaataccatgacgaataccatcctc
ggaccggaagaggtggtgaataagtacggcgtgccgccagaactgatcatcgatttcctg
gcgctgatgggtgactcctctgataacattcctggcgtaccgggcgtcggtgaaaaaacc
gcgcaggcattgctgcaaggtcttggcgggctggatacgctgtatgccgagccagaaaaa
attgctgggttgagcttccgtggcgcgaaaacaatggcagcgaagctcgagcaaaacaaa
gaagttgcttatctctcataccagctggcgacgattaaaaccgacgttgaactggagctg
acctgtgaacaactggaagtgcagccaccggcggcggaagagttgttagggctgttcaaa
aagtatgagttcaaacgctggactgctgatgtcgaagcgggcaaatggctacaggctaaa
ggggcgaaacccgcagccaggccgcaggaaaccagtgttgcagacgaagcgccagaagtg
acggcaacggtgatttcttatgacaactacgtcactatccttgatgaagaaacactgaaa
gagtggattgcgaagctggaaaaagcgccggtatttgcatttgataccgaaacagacagc
cttgataacatctctgctaacctggtcgggctttcttttgctatcgagccaggcgtagcg
gcatatattccggttgctcatgattatcttgatgcgcccgatcaaatctctcgcgagcgt
gcactcgagttgctaaaaccgctgctggaagatgaaaaggcgctgaaggtcgggcaaaac
ctgaaatacgatcgcggtattctggcgaactacggcattgaactacgtgggattgcgttt
gataccatgctggagtcctacattctcaatagcgttgccggacgtcacgatatggacagc
ctcgcggaacgttggttgaagcacaaaaccatcacttttgaagagattgcgggtaaaggc
aaaaatcaactgacctttaaccagattgccctcgaagaggccggacgttacgccgccgaa
gatgcagatgtcaccttgcagttgcatctgaaaatgtggccggatctgcaaaaacacaaa
gggccgttgaacgtcttcgagaatatcgaaatgccgctggtgccggtgctttcacgcatt
gaacgtaacggtgtgaagatcgatccgaaagtgctgcacaatcattctgaagagctcacc
cttcgtctggctgagctggaaaagaaagcgcatgaaattgcaggtgaggaatttaacctt
tcttccaccaagcagttacaaaccattctctttgaaaaacagggcattaaaccgctgaag
aaaacgccgggtggcgcgccgtcaacgtcggaagaggtactggaagaactggcgctggac
tatccgttgccaaaagtgattctggagtatcgtggtctggcgaagctgaaatcgacctac
accgacaagctgccgttgatgatcaacccgaaaaccgggcgtgtacatacctcttatcac
caggcagtaaccgcaacgggacgtttatcgtcaaccgatcctaacctgcaaaacattccg
gtgcgtaacgaagaaggtcgccgtatccgccaggcgtttattgcgccagaggattatgtg
attgtctcagcggactactcgcagattgaactgcgcattatggcgcatctctcgcgtgac
aaaggcttgctgaccgcattcgccgaaggaaaagatatccaccgtgcaacggcggcagaa
gtgtttggtttgccactggaaaccgtcaccagcgagcaacgtcgtagcgcgaaagcgatc
aactttggtctgatttatggcatgagtgctttcggtctggcgcggcaattgaacattccg
cgtaaagaagcgcagaagtacatggacctttacttcgaacgctaccctggcgtgctggag
tatatggaacgcacccgtgctcaggcgaaagagcagggctacgttgaaacgctggacgga
cgccgtctgtatctgccggatatcaaatccagcaatggtgctcgtcgtgcagcggctgaa
cgtgcagccattaacgcgccaatgcagggaaccgccgccgacattatcaaacgggcgatg
attgccgttgatgcgtggctacaggctgagcaaccgcgtgtgcgtatgatcatgcaggta
cacgatgaactggtatttgaagtccataaagatgatgtcgatgccgtcgcgaagcagatt
catcaactgatggaaaactgtacccgtctggatgtgccgttgctggtggaagtggggcgt
ggcgaaaactgggatcaggcgcactaa
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