Escherichia coli O81 ED1a (commensal): ECED1_5096
Help
Entry
ECED1_5096 CDS
T00827
Symbol
treR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecq03000
]
ECED1_5096 (treR)
Transcription factors [BR:
ecq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECED1_5096 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
TrmB
MarR
HHH
HTH_AraC
HTH_17
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
CAR11195
UniProt:
B7MTB9
LinkDB
All DBs
Position
complement(5033672..5034619)
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYGQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKTHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctacg
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacgcgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgatccaatcatgatggaaagt
cagttttccccacaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatggccagggacatcgtaatatcagctat
ctcggcgtgccgcacagtgacgtgacaaccggtaagcgacgtcacgaagcctaccttgcg
ttctgcaaaacgcataaattgcatcccgttgccgctctgccagggcttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgcgttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacaccgttaatgaaattcctccatccggagatcgtcaccgta
gatcccggttatgccgaagctggacgccaggcggcctgccagttgatcgcgcaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtcctga
DBGET
integrated database retrieval system
