Escherichia coli O81 ED1a (commensal): ECED1_5158
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Entry
ECED1_5158 CDS
T00827
Symbol
fecI
Name
(GenBank) RNA polymerase, sigma 19 factor; KpLE2 phage-like element
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECED1_5158 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecq03021
]
ECED1_5158 (fecI)
Transcription machinery [BR:
ecq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECED1_5158 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
PhyR_sigma-like
HTH_36
HTH_28
HTH_23
HAC6_helical
HTH_11
PCI
TnsD
HTH_40
HTH_3
DUF2774
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
CAR11111
LinkDB
All DBs
Position
complement(5092409..5092930)
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AA seq
173 aa
AA seq
DB search
MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRD
PRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDG
LNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAIEHCLLFRLEYGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcgccactaccacagcttccttaacgttcgagtcgctttatggcacacat
cacggctggttgaaaagctggctgacgcgcaaactccagtctgcttttgatgcagatgac
attgcccaggacacttttttgcgggtaatggtcagcgaaacgctctcgacgatccgcgat
cctcgctccttcctgtgcactatcgccaaacgcgtgatggtggacctgtttcgccgaaac
gcgctggaaaaagcgtatctggagatgctggcgcttatgccggaggggggagcgccttca
cctgaggaacgcgaaagccaactcgagaccctacaactcctcgacagcatgctggacggg
ctaaacggcaaaacacgtgaagcgtttctgctttcgcaactggatggtctgacatacagc
gagattgcgcacaaactcggtgtttccatcagctccgtgaaaaaatacgtggcgaaagcc
atcgagcactgcctgctgttccgtctggagtatgggttatga
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