Escherichia coli O8 IAI1 (commensal): ECIAI1_0547
Help
Entry
ECIAI1_0547 CDS
T00828
Name
(GenBank) Rhs core protein with extension
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Tox-REase-3
PAAR_motif
DUF6531
RHS
BA14K
Motif
Other DBs
NCBI-ProteinID:
CAQ97418
LinkDB
All DBs
Position
complement(589204..594003)
Genome browser
AA seq
1599 aa
AA seq
DB search
MSEGPGGPQGATAGGTLAMRMLSQQAMVASQMKRAANDKAIAQMLAAKKSGPPAARLGDE
IQHKSFLGALAGAVLGAIVTIAEGCLIMAACATGPYALVLVPALMYASYKASDYVEEKQN
QLESWINSFCDTDGAINTGSENVNINGKPAARAAVTLPPPPPPGAIPEVPQGEPSWGDIA
TDLLESAAEKAVPLAKAWGNAVITLTDSNAGFMDRLCAGTSLLFPAGPVLMEFATMVGGR
GEIKKDVDFPEAGEDTALCDKENKPPRIAQGSSNVFINNQPAARKGDKLECSAAIVEGSP
DVFIGGEQVTYLDIQPEFPPWQRMILGGITIASYLLPPAGLLGKLGNLAKLGKLGNLLGK
SGKLLGAKLGALLSRTKNALKNTYNVLKKFIKDPVDPVTGAYCDERTDFTLGQTLPLSFT
RFHCSVLPLHGLTGVGWSDSWSEYAWVREQGKRVDIISLGATLNFAFDGESDTAVNPYHA
QYILRRRDDYLELFDRDALSSRFFYDAFPGMRLRHPVTDDTSDDRLAHSPADRMYMLGGM
SDTASNRITFERDSQYRITGVSHTDGIRLKLTYHASGYLKAIHRTDNGIQTLATYEQDAR
GRLTEADARLDYHLFYEYDAADRIIRWSDNDQTWSRFTYDEQGRCVTVTGAEGYYNATLD
YGDGCTTLTDGKGTHRYYYDPDGNILREEAPDGSTTTYEWDEFHHLLARHSPAGRVEKFE
YNAAHGQLSRYTAADGAEWQYRYDERGLLSNITDPAGQTWTQQCDERGLPVSLVSPQGEE
TRLAYTAQGLLSGIFRQDERRLGIEYDHHNRPETLTDVMGREHHTEYSGHDLPVKMRGPG
GQSVRLQWQQHHKLSGLERTGTGAEGFRYDRHGNLLAWTDGNGVVWTMEYGPFDLPVART
DGEGHRWQYRYDKDTLQLTEVINPQGESYLYILDNCGRVTEERDWGGVVWRYRYDADGLC
TARVNGLEETILYSRDAAGRLAEVITPEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERG
RVNVTTQGRRAIEYHYPDEHTVIRCILPPEDERDRHPDESLLKTTYRYNAAGELTEVILP
GDETLTFSRDEAGREVFRHSNRGFACEQGWNAASQLVTQRAGFFPEEATWGGLLPSLVRE
YRYDSAGNVSAVTSREDYGRETRREYRLDRNGQVTAVTASGTGLGYGEGDESYGYDSCGY
LKAQSAGRHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTKHRDGYRPETERFRWD
SRDQLTGYCSAQGELWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDKLYS
VRHLVFNGFELISQQFSRVRQPHPSVAPQWVTRTNYAVSDLTGRPLMLFNSEGKTVWRPG
QTSLWGLALSLPADTDYPDPRGELDPEAAPGLLYAGQWQDAESGLCYNRFRYYEPETGMY
LVSDPLGLQGGEQTYRYVPNPLGYIDPLGLAKTSVPAEKISLSDKARDLFRQGKVREALD
VHYEDLVRRKLGGISQEIAGREYDVVTDKIIAQVKRTYSSIDNPKNFLSKSTRTQIKKTI
ELAEEQGKEAQFWFKYGVSPKVREYIESKGGKVILGMGN
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggaccaggcgggccacagggagcgaccgcaggcggtacgctggcaatgcga
atgctgtcacagcaggcgatggtcgccagccagatgaaacgggcagccaacgacaaagcc
attgcacagatgctggcagcaaagaagtccggcccacctgccgccaggctgggcgatgaa
attcagcataaaagttttctgggggcactggcaggggccgtgctgggggcgatagtgacc
atcgcagaaggttgcctgattatggccgcctgtgccaccggcccttatgcgctggttctg
gtgcctgcgctgatgtatgccagctataaggcgagtgattatgtggaggagaaacagaac
cagcttgagtcatggataaacagcttttgtgacacggacggcgccatcaataccggttct
gaaaatgtaaacattaacggaaagcccgctgccagagccgccgtcacccttccccctcct
cccccacctggagcaatacctgaagtcccacagggggaaccctcatggggtgatattgcc
actgacctgcttgaatcggcagcggaaaaagcagtaccactggcgaaggcctgggggaac
gctgttatcaccctgacggacagcaatgccggttttatggatcgcttatgtgcaggcaca
tcgcttctgtttcccgccggtccggtattaatggagtttgccaccatggtgggcgggcgt
ggcgaaatcaaaaaagacgtggatttcccggaagccggtgaggacacggcgctctgcgac
aaggagaacaaaccaccgaggatagcccagggcagcagcaacgtctttatcaacaatcag
cctgccgcgcgcaagggcgacaaactggagtgcagcgcggcaatcgtggaaggttcgccg
gacgtctttattgggggtgagcaggtcacctatctggatatccagccggagttcccgcca
tggcagagaatgatcctgggaggaataacgatagccagctatcttctgccgccagcagga
ctgctgggaaaactggggaatctggcgaaactgggcaaactgggaaacctgctggggaaa
agcgggaagctgctgggtgcaaaactcggcgcattgctgagcagaacaaaaaatgccctg
aaaaatacgtataacgtcctgaaaaagtttatcaaagatccggttgacccggtaaccggc
gcgtactgcgacgaacgtactgacttcaccctgggccagacactccccctctccttcacc
cgcttccactgttcggtactgccactgcatggcctgaccggcgtgggctggagcgattcc
tggagcgaatacgcctgggtgcgtgaacagggaaagcgggtggatatcatcagcctggga
gccacgctgaacttcgccttcgacggtgaaagtgatacggcggttaacccgtatcacgcc
cagtacatcctgcgccgccgtgatgattacctggagctgttcgaccgtgatgccctgagc
agccgcttcttttatgacgcctttccgggaatgcgcctgcgccacccggtgactgacgat
accagcgatgaccgcctggcacacagccccgcagaccggatgtacatgctgggcgggatg
agcgacaccgccagcaaccgcatcacgtttgagcgcgacagccagtaccggatcacaggt
gtcagtcacaccgacgggatccggcttaaactgacgtaccatgccagcggctacctgaaa
gccattcaccgtacggataacggcatacagacgctggcgacctacgaacaggatgcgcgg
gggcggctgacagaagcggatgcgcggctggactaccacctgttttatgagtacgacgct
gcggaccggatcatccgctggtccgataacgaccagacgtggagccgtttcacctacgat
gaacagggccggtgcgtgaccgtcaccggggcggagggctattacaacgccacgctggac
tatggtgacggctgcaccaccctgacggacggcaagggcactcaccgttattactatgat
cctgacggcaatattctgcgggaagaagcgccggacggcagcaccaccacgtatgaatgg
gatgaattccatcacctgctggcccgccactcccctgccgggcgggtggagaaatttgaa
tacaacgccgcacacggccagctaagccgttacacggcagcagacggtgcggagtggcag
taccgctatgatgagcgcggcctgctcagcaacatcaccgaccctgccgggcagacgtgg
acacagcagtgtgatgaacgcggcctgccggtaagcctggtgtcgccacagggcgaagag
acccggctggcatacaccgctcaggggctgctgtcgggaatattccgccaggatgaacgg
cgtctgggcatagagtacgaccaccacaaccggccggaaacactcaccgacgtgatgggc
cgtgaacaccacaccgaatacagcggtcacgacctgccggtgaagatgcgcggccccggc
ggtcagtcagtgcggttgcagtggcagcagcaccataaactgagcggccttgagcgcact
ggcaccggcgcggaaggattccgctatgaccgccacggcaacctgctggcctggacggac
ggcaacggtgttgtctggacgatggaatacggtccgttcgatttgccggtggcgcgaacg
gacggtgaaggccaccgctggcagtatcgctacgataaagacacgctgcaactgacagaa
gtcattaacccgcagggcgagtcttatctttatattctcgataactgtggccgggtgacg
gaagagcgtgactggggcggcgtggtctggcgttaccgctatgacgccgatggcctctgt
accgccagggtcaacggactggaggaaaccatcctctacagccgggacgccgcaggccgc
ctggcagaagtcatcacgccggaaggcaaaacgcagtatgcctatgacaaatccggcagg
ctgacgggtatcttcagcccggacggtacatcacagcgcaccggctatgacgaacgcggg
cgggtgaatgtcaccactcagggccgacgggccattgaataccactaccccgatgaacac
accgttatccgctgtatcctgccaccggaagatgaacgcgacagacaccccgatgaatcc
ctgctgaaaaccacgtaccgttataacgccgccggagaactgacggaggtcattctgccg
ggggatgagacgctgacgttcagccgtgatgaggcgggacgtgaagtgttccggcacagt
aaccggggttttgcctgtgagcagggctggaatgcagccagccagcttgtcacccagcgc
gccggattttttccggaagaagccacatggggcgggctgctcccctcactggtacgggag
taccgttacgacagcgcgggcaatgtgtcggctgtcaccagccgggaagattacggacgg
gaaacacggcgggaataccggctggaccggaacggtcaggtcacggcggtgacagcctca
ggcaccgggctgggctatggcgaaggcgatgagtcctatggctatgacagttgtggctac
ctgaaggcgcagtctgcgggcaggcaccggataagtgaagagactgaccagtatgccgga
ggccaccggctgaaacaggccggaaacacgcagtatgactatgacgccgcaggccggatg
gtcagccggacaaaacaccgtgacggctaccgcccggaaacagagcggttccggtgggac
agccgggaccagctgaccgggtattgcagcgcacagggtgagctgtgggaataccgccac
gacgccagcggcagacgaacagagaaacgctgcgaccggaagaaaatccgcttcacgtat
ctgtgggacggcgacagtattgcggaaatccgggaataccgcgatgataaactgtacagc
gtacggcacctggtgtttaacggctttgagctgataagccagcagttcagccgggtacgg
cagccgcatccgtccgtggccccgcagtgggtgacgcgaacgaattatgcggtgagcgac
ctgacgggccgtccgctgatgctctttaacagtgaaggtaaaaccgtctggcgaccgggg
cagaccagcctgtgggggctggcactcagtctgcccgcagacacagactacccggacccg
cgcggggaactggacccggaagccgcccccggcctgctgtatgcgggacagtggcaggat
gcggaatccgggctgtgctataaccggttccggtattacgagccggaaaccggaatgtac
ctggtgagtgacccgctggggttgcaggggggtgagcagacttaccggtatgtgccgaat
ccactggggtatattgatccgctggggctggcaaaaacttctgttcccgcagaaaaaata
agcctttcggataaagcaagagatctttttagacaaggaaaagtaagagaagcattagat
gttcattatgaggatcttgtacgaagaaagcttggtggtatatctcaagaaattgccggg
cgtgaatatgatgttgttactgacaagatcatagcgcaggtcaagaggacttatagctct
atagataatccaaaaaacttcttaagtaagtctactcggacacaaattaagaagacaatt
gagctggctgaagaacaggggaaagaggctcagttttggtttaaatatggagtaagccct
aaagtaagagaatatatagaaagcaaaggtgggaaagttatattgggtatggggaattaa
DBGET
integrated database retrieval system
