Escherichia coli O8 IAI1 (commensal): ECIAI1_1148
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Entry
ECIAI1_1148 CDS
T00828
Symbol
ycfQ
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_1148 (ycfQ)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECIAI1_1148 (ycfQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_11
HTH_Tnp_1_2
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
CAQ98010
LinkDB
All DBs
Position
complement(1209993..1210625)
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AA seq
210 aa
AA seq
DB search
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEF
TNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMI
NNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPTHCDVTHLAEFLNCIIQG
MSISAREGASLEKLMQIAGTTLRLWPELVK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgactcaacacaatgtgtaaaaaaaagccgtggccgcccaaaagtgttcgac
agggatgccgcgcttgataaggccatgaaattgttctggcaacacggttatgaagcgact
tctcttgcggacctcgtcgaagcgaccggagccaaagcgcccacgctatacgcggaattt
accaacaaagaggggttatttcgtgccgttctcgaccgctatatcgatcgttttgccgct
aagcatgaagcacagctgttttgtgaagagaaaagcgtggagtctgcgctggctgactat
tttgctgccatcgccaactgctttaccagcaaagacaccccggcaggctgcttcatgatc
aacaactgcaccaccctctccccagattcaggagatatcgccaatacgttgaaatcacgc
catgcgatgcaagagcgcactttgcagcagtttttatgtcaacgacaagcgcgcggggaa
atcccgacccactgtgacgtgacacatctggcagaattccttaattgtattattcagggg
atgtcgatcagcgcacgcgaaggtgcatcgctggaaaaactaatgcagattgccggaacg
actttgcgtttatggcccgaactggtgaaataa
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