Escherichia coli O8 IAI1 (commensal): ECIAI1_1287
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Entry
ECIAI1_1287 CDS
T00828
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecr03009
]
ECIAI1_1287 (rluB)
Enzymes [BR:
ecr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ECIAI1_1287 (rluB)
Ribosome biogenesis [BR:
ecr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECIAI1_1287 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAQ98146
LinkDB
All DBs
Position
1347771..1348670
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AA seq
299 aa
AA seq
DB search
MKATLKGSSMSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIR
IDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDV
NTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKT
IKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTE
LDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgacactaaaaggaagctctatgagcgaaaaattacagaaagtgctggcccgc
gctggccacggctcccgccgtgaaatcgaatctattattgaagccggtcgtgtgagtgtt
gatggcaaaattgctaaactcggcgatcgcgttgaagttacccctgggctgaaaattcgt
atcgatggtcatctgatttcggtacgtgagtccgctgaacaaatttgtcgcgttctggcc
tattacaaaccggaaggtgagttgtgtacccgtaacgatccggaagggcgtccgacggtg
tttgaccgtctgccaaagctgcgtggcgcacgctggattgccgtaggtcgtctggacgtt
aacacctgtggtctgctgctgttcaccaccgatggtgaactggcaaaccgtttaatgcat
ccaagccgtgaagttgaacgtgaatacgccgtgcgtgtatttggtcaggttgacgacgcg
aaactgcgtgatttgagtcgtggcgtgcaactggaagatggtccggcagcttttaaaacc
atcaagttcagcggcggcgaagggatcaaccagtggtacaacgtgactctgaccgaaggc
cgtaaccgtgaagttcgtcgtctgtgggaagcggttggtgtgcaggtgagccgcctgatc
cgtgttcgttacggtgatatcccactgccaaaaggtctgccacgcggtggctggacggag
ctggacctcgcccagactaactatctgcgcgaactggtggagctaccgccagaaaccagc
tctaaagtcgctgtagaaaaagaccgtcgtcgcatgaaggcgaatcagattcgtcgtgcg
gtgaaacgtcacagtcaggtgagcggcggtcgtcgttctggcggacgtaataacggttaa
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