Escherichia coli O8 IAI1 (commensal): ECIAI1_1328
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Entry
ECIAI1_1328 CDS
T00828
Symbol
pspF
Name
(GenBank) DNA-binding transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_1328 (pspF)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Other transcription factors
Others
ECIAI1_1328 (pspF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
UPF0175
AAA
AAA_16
AAA_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAQ98187
LinkDB
All DBs
Position
complement(1387875..1388852)
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AA seq
325 aa
AA seq
DB search
MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPF
ISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKL
LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLR
ERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRH
GTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKY
NQKRAAELLGLTYHQFRALLKKHQI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacaaagataatttacttggtgaggcgaacagctttctcgaagtgctggaa
caggtttcgcatctcgcaccgctggacaaaccggtgctcatcatcggcgaacgcggcacc
ggtaaagagctgattgccagccgcctgcattatctctcctcccgttggcaagggccgttt
atttcccttaactgcgcggcgttaaatgaaaatctgctggattccgaactgtttggtcac
gaagcgggggcgtttaccggtgcgcaaaaacgtcatccagggagatttgaacgtgccgac
ggcggtacgctatttcttgatgaactcgctacggcaccgatgatggtgcaggagaaatta
ttgcgcgtgattgagtacggtgaactggagcgcgttggcggcagccagccattgcaggtg
aatgtgcggttggtatgcgcgacgaatgccgatctcccggcgatggtcaatgaaggcact
tttcgcgctgacctgctcgaccgactggcttttgatgttgtacaactgccaccactgcgc
gagcgcgaaagcgacataatgttgatggcagaacactttgccatccagatgtgtcgggaa
atcaagctgcctctgttcccggggtttacggagcgcgccagagaaacattgctgaattat
cgttggccgggaaatattcgtgaattgaaaaacgtggtggaacgttcagtgtatcgccac
ggcaccagcgattatccgcttgatgacatcattattgatccctttaaacggcgtccgcct
gaagacgctatcgccgtttcagaaaccacctcgcttccaacactgccgctggatttacgt
gagtttcagatgcagcaggaaaaagagttgctgcaactcagtttgcaacaagggaaatat
aaccagaagcgcgcggctgaattactggggttaacttatcatcagttccgcgcgttgttg
aaaaagcaccagatttag
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