KEGG   Escherichia coli O8 IAI1 (commensal): ECIAI1_1434
Entry
ECIAI1_1434       CDS       T00828                                 
Symbol
ydcQ
Name
(GenBank) putative DNA-binding transcriptional regulator
  KO
K18843  antitoxin HicB
Organism
ecr  Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:ecr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecr02048]
    ECIAI1_1434 (ydcQ)
Prokaryotic defense system [BR:ecr02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HicA-HicB
    ECIAI1_1434 (ydcQ)
SSDB
Motif
Pfam: HicB_lk_antitox HTH_3 MarR_2 HicB-like_2 HTH_24
Other DBs
NCBI-ProteinID: CAQ98292
LinkDB
Position
1498755..1499192
AA seq 145 aa
MRETVEIMRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFED
NELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNL
HHATKIDAVQLAAKALGKELSLVMV
NT seq 438 nt   +upstreamnt  +downstreamnt
atgcgagagacagtcgaaattatgcgttatcccgtcactcttacacccgcgccggaaggc
ggttatatggtttcttttgtggatatccctgaagcgttgacgcagggcgaaactgtcgct
gaagcgatggaagcggcaaaagatgctttactgaccgcatttgatttttattttgaagat
aacgagcttatcccgttaccttcgccattaaatagtcatgatcactttattgaagtacct
ttgagcgtcgcctctaaggtattgctgttaaatgcttttttacagtcagaaatcactcag
caagagttagccaggcgaattggcaaacctaaacaggagattactcgcctatttaacttg
caccatgcgacaaaaatcgacgccgtccagcttgcggcaaaggcgcttggcaaagagtta
tcgctggtgatggtttaa

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