Escherichia coli O8 IAI1 (commensal): ECIAI1_1492
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Entry
ECIAI1_1492 CDS
T00828
Name
(GenBank) Putative transcriptional regulator (LysR family)
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_1492
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ECIAI1_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CAQ98349
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Position
1563145..1564035
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AA seq
296 aa
AA seq
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MKMSIKQLRAFLAVAHTLNFAHASERLNMSQPALSLAIKGLEDALGGALLLRTTRKVTLT
QEGETLLSMARPLLADWDNTEEAMRQRFTLRRGKVSVAAMPSFAANVLPPVLKTFRDCYS
GINVTVHDVVNEQVIEMVSEGRVEMGIAFEPDYCGHVHFTPLGVDRFVAIVPADSRLANR
QRVSWRDLLTLDFITLQRPSAVRLMLEEQLAQSGTQLEVALESHQLVTVGRLVANGLGGS
AVPALCRRQMSELGAVCLELDNPVIERRVGVLRSSHHKLSTAAQALMETLKKTYDA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcatcaaacagttacgcgcgtttttagcggtagctcacactctgaacttt
gcccatgccagtgaacggctgaatatgtcgcagcctgcgctaagtcttgccattaaagga
ctggaagatgccttagggggcgctttactgctgcgtactacgcgaaaagtgacattaacc
caggagggggaaacgctattgtcgatggcacggcctttgctggctgactgggataacact
gaggaggccatgcgtcagcgattcacgctcaggcggggcaaagtctcggtggcagcgatg
ccgtcatttgcagccaacgttctgcctccggtgctgaaaaccttccgcgattgttattca
gggattaatgtcaccgtgcacgatgtggtgaatgagcaggtgatcgaaatggtgagcgaa
gggcgtgtggagatgggtattgcctttgaacctgactattgcggccatgtgcattttacc
ccactgggcgtggatcggtttgtcgctattgttccagccgattcacgactggcaaatcgg
caacgcgtgagttggcgggatttgctgacgctcgattttatcaccctccagcgaccgtca
gccgtcaggttgatgctggaggagcagttggcacaaagtggaacgcaactggaagtggcg
ctggaaagccatcaactggttacggttgggcggctggtggcaaacggtttgggaggaagc
gctgtgcctgcgctgtgccgcaggcagatgagcgaactgggcgcagtgtgtctggaactg
gataatccagtgattgagcgacgagtaggcgtactgcgttcgtcacaccataagctttct
actgcggcgcaggcgttgatggaaacgttaaaaaaaacctatgacgcataa
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