Escherichia coli O8 IAI1 (commensal): ECIAI1_2007
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Entry
ECIAI1_2007 CDS
T00828
Symbol
fliA
Name
(GenBank) RNA polymerase, sigma 28 (sigma F) factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Pathway
ecr02020
Two-component system
ecr02026
Biofilm formation - Escherichia coli
ecr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECIAI1_2007 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECIAI1_2007 (fliA)
09142 Cell motility
02040 Flagellar assembly
ECIAI1_2007 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecr03021
]
ECIAI1_2007 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecr02035
]
ECIAI1_2007 (fliA)
Transcription machinery [BR:
ecr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECIAI1_2007 (fliA)
Bacterial motility proteins [BR:
ecr02035
]
Flagellar system
Flagellar assembly proteins
Stator
ECIAI1_2007 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
UPF0122
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
CAQ98858
LinkDB
All DBs
Position
complement(2064198..2064917)
Genome browser
AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacagtaatctgcgccag
cgagtgatggaagctatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggccattaaacggttacgcactaaactgggtaagttataa
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