Entry |
|
Symbol |
srmB
|
Name |
(GenBank) ATP-dependent RNA helicase
|
KO |
|
Organism |
ecr Escherichia coli O8 IAI1 (commensal)
|
Brite |
KEGG Orthology (KO) [BR:ecr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:ecr03009]
ECIAI1_2690 (srmB)
Enzymes [BR:ecr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECIAI1_2690 (srmB)
Ribosome biogenesis [BR:ecr03009]
Prokaryotic type
rRNA helicases
ECIAI1_2690 (srmB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2778674..2780008
|
AA seq |
444 aa
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV
HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL
GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKAKEKEKPRVKKRH
RDTKNIGKRRKPSGTGVPPQTTEE |
NT seq |
1335 nt +upstreamnt +downstreamnt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggaagccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggtccgccgcgtattttg
atcctcaccccaactcgcgagctggcgatgcaggtggccgatcatgcccgcgaactggcg
aaacatacgcatctggatatcgccaccatcaccggcggcgtagcctatatgaaccacgcg
gaagtgttcagcgaaaatcaggacatcgtggtcgccacgaccggacgtctgctgcaatac
ataaaagaagagaacttcgattgccgcgcggttgaaacgctgatcctcgacgaagcagac
cgtatgctggatatgggcttcgctcaggatatcgaacatattgctggcgaaacgcgctgg
cgtaaacagaccctgctcttttcggcaacgctggaaggcgatgcgattcaggactttgcc
gagcgtctgctggaagatccggtggaggtttctgccaatccgtccacccgtgagcgcaaa
aaaattcatcagtggtattaccgcgccgatgacctggaacataaaaccgcattgctggtg
catctgttaaaacagccggaagcgacccgctcaattgtgtttgtgcgtaagcgtgaacgt
gtgcatgagctggcaaactggctgcgcgaagcgggcatcaacaactgctatctcgaaggt
gagatggtacaaggcaagcgtaacgaagcgatcaagcgtttgaccgaaggtcgcgtaaac
gtactggttgcaaccgatgttgccgcgcgcggtatcgacattcctgacgtcagccacgtc
tttaacttcgatatgccgcgcagtggcgatacttatttgcaccgtatcggacgtaccgcg
cgcgccggtcgtaaaggcaccgcaatttcgctggtggaagcccatgaccatttgctgctg
ggcaaggttggccgttacattgaagagccgattaaagctcgcgttattgatgagttacgc
ccgaaaacgcgtgcgccaagcgagaagcagaccggcaagccatcgaagaaagtactggca
aaacgcgccgagaagaaaaaagctaaagagaaagagaaaccgcgtgtgaaaaaacgccat
cgcgacaccaaaaatattggtaagcgccgtaaaccaagcggaacgggcgtgccaccgcaa
acgacagaagagtaa |