Escherichia coli O8 IAI1 (commensal): ECIAI1_2922
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Entry
ECIAI1_2922 CDS
T00828
Symbol
ygdL
Name
(GenBank) conserved hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecr03016
]
ECIAI1_2922 (ygdL)
Transfer RNA biogenesis [BR:
ecr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ECIAI1_2922 (ygdL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
DAO
UDPG_MGDP_dh_N
NAD_binding_7
3HCDH_N
ELFV_dehydrog
ApbA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAQ99740
LinkDB
All DBs
Position
complement(2996336..2997142)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAKVMAERIRQINPECRVTVVDDFVTPDNVAQYMSA
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcgttgcaactgtttgctgacgcgcatatttgtgtggtcggtatcggtggt
gtcggttcctgggcggcggaagcgctggcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcatgccctgcgcgataac
gttgggctggcaaaagcgaaagtcatggcggaacgtattcgccagattaacccggagtgc
cgtgtaacggtggtggatgatttcgtgacgccggataacgtagcgcagtatatgagtgcc
ggttattcgtacgtgattgatgccattgatagtgtacgacccaaagcggcgctgattgct
tattgtcggcgcaataaaatcccgctggtcacgaccggtggcgcgggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggacccgctggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtggattgcgtgttttctactgaagcgctggtgtacccgcagtcagacggtacggtgtgt
gcgatgaaagccacggcagaagggccgaagcggatggattgtgcatctggatttggcgcg
gcaacgatggtgaccgccacctttgggtttgttgcggtttctcatgcgctgaagaagatg
atggcgaaagcggcgcgtcagggttaa
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