Escherichia coli O8 IAI1 (commensal): ECIAI1_2938
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Entry
ECIAI1_2938 CDS
T00828
Symbol
nudH
Name
(GenBank) nucleotide hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Pathway
ecr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECIAI1_2938 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecr03019
]
ECIAI1_2938 (nudH)
Messenger RNA biogenesis [BR:
ecr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECIAI1_2938 (nudH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
CAQ99756
UniProt:
B7LY86
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All DBs
Position
complement(3019749..3020279)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaacgtaggtatcgtgatttgtaatcgccagggg
caggtaatgtgggcccggcgatttggtcagcactcctggcaatttccgcaaggcggaatc
aaccccggagaatccgcagagcaggcgatgtaccgtgaattgtttgaagaagtaggatta
agccgcaaagacgttcgaatccttgcttcaacgcgtaactggttgcgctacaaattaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccaaaaacaaaaatggttt
ctcttgcagctggtgagcggcgatgcagaaatcaatatgcaaaccagcagcacaccagag
tttgacggctggcgatgggtaagttactggtatccggtcagacaggtggtgtcatttaaa
cgtgatgtctaccgtagggtaatgaaagagttcgcgagtgtggtgatgtcactgcaggaa
aatacgccaaaaccacaaaacgcatctgcttatcgacgtaaaagaggttaa
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