Escherichia coli O8 IAI1 (commensal): ECIAI1_3316
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Entry
ECIAI1_3316 CDS
T00828
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecr03016
]
ECIAI1_3316 (truB)
Enzymes [BR:
ecr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECIAI1_3316 (truB)
Transfer RNA biogenesis [BR:
ecr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECIAI1_3316 (truB)
Prokaryotic type
ECIAI1_3316 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAR00130
LinkDB
All DBs
Position
complement(3400504..3401448)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKSQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaatcg
cagggtatgtccagcaatgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gccgggcataccggtgcgctggacccgctggcaactggcatgttgccaatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacaaatcgttgaagaacgtccg
gtaacctttagcgcagagcaactggcggcggcgctggatactttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaatatcagggtaaaaaactgtacgaatatgcg
cgtcagggcattgaagtaccgcgtgaagcgcgcccgattaccgtttatgaattgctgttt
attcgccacgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctaggtgaaaaactcggttgtggcgcgcatgttatttacctg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggaacatctgcgt
gaactggtcgaacaagccgaacagcaggatattccggctgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccagttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagaaggtgagaacggcaaatttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
