KEGG   Escherichia coli O8 IAI1 (commensal): ECIAI1_3433
Entry
ECIAI1_3433       CDS       T00828                                 
Symbol
yrdD
Name
(GenBank) putative DNA topoisomerase
  KO
K07479  putative DNA topoisomerase
Organism
ecr  Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:ecr00001]
 09190 Not Included in Pathway or Brite
  09192 Unclassified: genetic information processing
   99976 Replication and repair
    ECIAI1_3433 (yrdD)
SSDB
Motif
Pfam: Zn_ribbon_Top1 CoiA_N DUF7340 Zn_Ribbon_1 DNA_ligase_ZBD Zn_Ribbon_TF Zn_ribbon_3 Zn_ribbon_FGT1_2 Trm112p Zn_ribbon_InsA DUF5817 Zn_ribbon_RPB9 HMBD HVO_2753_ZBP
Other DBs
NCBI-ProteinID: CAR00235
LinkDB
Position
complement(3512478..3513020)
AA seq 180 aa
MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLE
GQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSR
YGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE
NT seq 543 nt   +upstreamnt  +downstreamnt
atggcgaaatcagcactgttcacggtgcgtaataatgagtcctgcccaaagtgcggggct
gaactggttattcgatccgggaaacacggtccgtttcttggatgctcacagtatccggcg
tgtgactacgtccgtcctctgaaatcttcagcggatggacatattgtcaaagttctggag
gggcaggtttgccctgcatgtggcgcaaatctggtattacgccagggacgctttggtatg
tttattggttgcagtaactaccctgaatgcgaacataccgaacttatcgataaaccggac
gaaacagcaattacatgcccccaatgccggacgggccatctggtccagcgccgctcccgt
tatggcaaaacatttcactcctgtgatcgctacccggagtgtcaatttgccattaacttc
aaacccatagctggagaatgccctgagtgtcattatccactactcatcgaaaagaaaacc
gcgcagggtgtaaaacacttttgtgccagtaaacaatgtggaaagccggtttcggcggaa
taa

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