Escherichia coli O8 IAI1 (commensal): ECIAI1_3937
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Entry
ECIAI1_3937 CDS
T00828
Symbol
rbsR
Name
(GenBank) DNA-binding transcriptional repressor of ribose metabolism
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_3937 (rbsR)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECIAI1_3937 (rbsR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_35
HTH_3
MerR
HTH_38
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CAR00731
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All DBs
Position
4014645..4015637
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AA seq
330 aa
AA seq
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MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTH
TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLL
LLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRI
ACITGPLDKTPARLRLEGYRAAMKRAGLSIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQ
AVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA
IDVLIHRITQPTLQQQRLQLTPILMERGSA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaatgaaagatgttgcccgcctggcgggcgtttctacctcaacagtttctcac
gttatcaataaagatcgcttcgtcagtgaagcgattaccgccaaagttgaagcggcgatt
aaagaactcaattacgcgccatcagccctggcgcgtagcctcaaactcaatcaaacacat
accattggcatgttgatcactgccagtaccaatcctttctattcagaactggtgcgtggc
gttgaacgcagctgcttcgaacgcggttatagtctcgtcctttgcaataccgaaggcgat
gaacagcggatgaatcgcaatctggaaacgctgatgcaaaaacgcgttgatggcttgctg
ttactgtgcaccgaaacgcatcaaccttcgcgtgaaatcatgcaacgttatccgacagtg
cctactgtgatgatggactgggctccgttcgatggcgacagcgatcttattcaggataac
tcgttgctgggcggagacttagcaacgcaatatctgatcgataaaggtcatacccgtatc
gcctgtattaccggtccgctggataaaactccggcgcgcctgcggttggaaggttatcgg
gcggcgatgaaacgtgcgggtctcagcattcctgatggctatgaagtcactggtgatttt
gaatttaacggcgggtttgacgccatgcgccaactgttatcacatccgctgcgtcctcag
gccgtctttaccggaaatgacgctatggctgttggcgtttaccaggcgttatatcaggca
gagttacaggttccgcaggatatcgcggtgattggctatgacgatatcgaactggcaagc
tttatgacgccaccattaaccactatccaccaaccgaaagatgaactgggggagctggcg
attgatgtactcatccatcggataacccagccgacccttcagcaacaacgattacaactt
actccgattctgatggaacgcggttcggcttag
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