Escherichia coli O8 IAI1 (commensal): ECIAI1_4112
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Entry
ECIAI1_4112 CDS
T00828
Symbol
rhaR
Name
(GenBank) DNA-binding transcriptional activator, L-rhamnose-binding
KO
K02854
AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_4112 (rhaR)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECIAI1_4112 (rhaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
Cupin_2
ARD
Motif
Other DBs
NCBI-ProteinID:
CAR00883
LinkDB
All DBs
Position
4179660..4180598
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AA seq
312 aa
AA seq
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MVFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDV
FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC
PERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAEL
LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR
QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
PSQWRHLNSQKD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttttctgcaataacgcgaatcttctcaacgtatttgtacgccatattgcgaataat
caacttcgttctctggccgaggtagccacggtggcgcatcagttaaaacttctcaaagat
gatttttttgccagcgaccagcaggcagtcgctgtggctgaccgttatccgcaagatgtc
tttgctgaacatacacatgatttttgtgagctggtgattgtctggcgcggtaatggcctg
catgtactcaacgatcgcccttatcgcattacccgtggcgatctcttttacattcatgct
gacgataaacactcctacgcttccgttaacgatctggttttgcagaatattatttattgc
ccggagcgtctgaagctgaatcttgactggcagggggcgattccgggatttagcgccagc
gcagggcaaccacactggcgcttaggtagcgtggggatggcgcaggcgcggcaggttatc
ggtcagcttgagcatgaaagtagtcagcatgtgccgtttgctaacgaaatggctgagttg
ctgttcgggcagttggtgatgttgctgaatcgccatcgttacaccagtgattcgttgccg
ccaacatccagcgaaacgttgctggataagctgattacccggctggcggctagcctgaaa
agtccctttgcgctggataaattttgtgatgaggcatcgtgcagtgagcgcgttttgcgt
cagcaatttcgccagcagactggaatgaccatcaatcaatatctgcgacaggtcagagtg
tgtcatgcgcaatatcttctccagcatagccgcctgttaatcagtgatatttcgaccgaa
tgtggctttgaagatagtaactatttttcggtggtgtttacccgggaaaccgggatgacg
cccagccagtggcgtcatctcaattcgcagaaagattaa
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