Escherichia coli O8 IAI1 (commensal): ECIAI1_4140
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Entry
ECIAI1_4140 CDS
T00828
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Pathway
ecr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECIAI1_4140 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecr03400
]
ECIAI1_4140 (priA)
Enzymes [BR:
ecr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECIAI1_4140 (priA)
DNA repair and recombination proteins [BR:
ecr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECIAI1_4140 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
CAR00911
LinkDB
All DBs
Position
complement(4205717..4207915)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWQTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgatgtcagtgagctgccgcttaacgagctg
aaagcggtagtggaagtgctggacgttgagccggtatttactcactccgtctggcggtta
ctgctctgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccaggcggtggatctgaacagcctgaaacgctcccccaagcaacaacag
gcgctggcggcgttacggcaaggcaaaatctggcgcgaccaggtcgccacgctcgaattt
aatgatgccgcgttgcaggcgctacgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcaaacgaactatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagtgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtggaagttctgcattccggcctg
aacgacagcgagcggctttcggcgtggttgaaagcgaaaaatggcgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcatagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttgtgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgccgg
gcggggaatgcgcgtccggcaattcaacacgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccaacaatcag
gttatcctctttcttaatcgtcggggttttgcgcctgcgctactgtgccacgactgcggc
tggattgccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgcttgcgccg
ctgttccctgatgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacagcaactggcggaagtacatcgcggcggtgcgaggattttgatcggcacacaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgtttcgctcagctttacacccag
gtcgctggtcgtgccgggcgtgcgggtaaacaaggcgaagtggtgctgcaaacgcaccat
ccagaacatcctctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcgacggatgatgcaactgccgccatggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcatgcgccgctgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaactgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattagtggtacgctggcgctcatcaatacaataccggattcccgcaag
gtgaaatgggtactggatgttgatccgattgagggttaa
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integrated database retrieval system
