Escherichia coli O8 IAI1 (commensal): ECIAI1_4579
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Entry
ECIAI1_4579 CDS
T00828
Symbol
yjjM
Name
(GenBank) putative DNA-binding transcriptional regulator
KO
K23015
GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
Organism
ecr
Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:
ecr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecr03000
]
ECIAI1_4579 (yjjM)
Transcription factors [BR:
ecr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ECIAI1_4579 (yjjM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
FCD
HTH_Crp_2
Rrf2
HVO_A0261_N
HTH_24
HTH_IclR
Phage_rep_O
HTH_11
HTH_36
HTH_5
HTH_28
CENP-B_N
HTH_DeoR
HTH_23
HTH_29
Sigma70_r4
TrmB
Mab-21_C
Motif
Other DBs
NCBI-ProteinID:
CAR01320
LinkDB
All DBs
Position
complement(4653941..4654855)
Genome browser
AA seq
304 aa
AA seq
DB search
MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQ
VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAG
VSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD
HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF
HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT
RYAH
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcacaaaatttacgccacaatgtgattaaccaggtcattgatgatatggcg
cggggtcatatcccttccccacttccatcgcaaagtgcgctggcggaaatgtacaacatc
agccgcacaacagtgcgtcatattctcagccacttacgcgaatgcggcgtcttaacgcag
gttggaaacgactatgttattgcgcgtaaacctgaccatgatgacggtttcgcctgtact
accgcttcaatgagtgaacaaaacaaagtgtttgagcaggcttttttcacgatgataaac
cagcgtcagttacgccctggggaaactttttctgaactgcaactggctcgggccgcgggt
gtcagcccggtggttgtaagagaatatcttttaaaattcggccgttataatcttattcaa
agcgaaaaacgcggccagtggagcatgaagcaattcgatcaatcctacgccgagcagctg
tttgagctacgcgaaatgctcgaaacacattcacttcagcactttctcaacctgcctgat
catgatccccgctggctgcaggcgaaaaccatgctcgaacgtcatcggctactgcgtgac
aacatcggcaatagctttcgcatgttctcgcaacttgacagagattttcactccttactg
ctttcagctgccgacaatatcttttttgatcaatcgcttgagatcatctcagtcatcttt
cattttcactatcaatgggacgaaagcgatcttaaacagcgcaatatcattgccgtcgat
gagcatatgaccattctcagcgctctgatttgccgcagtgaccttgatgccacccttgcg
ctccgtaaccatttgaattcagctaaacaatcaatgattcgatccattaatgagaacacg
cgttatgctcattaa
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