Etheostoma cragini (Arkansas darter): 117934569
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Entry
117934569 CDS
T07493
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
ecra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117934569
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117934569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117934569
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117934569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
117934569
NCBI-ProteinID:
XP_034712209
LinkDB
All DBs
Position
19:complement(13167010..13353279)
Genome browser
AA seq
2235 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVWVRSTNEPLYQGQCHYPNKA
MPSAGVLPWLQGMICNVNNPCLNYSTPGEAPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQWLADDLGQWDSVLSQSTLGNAKPMILRSILRDNEAFSTYLKENLSVPPSVVQSLMNA
GINLNPMTRPGNLKSILCEGTDLDKYIQFSSTAEKVAFQNVSCSRTPQQLINAQQVLLQN
LDAGKVLSKVPSALNLNAALMGKTTQDALLVIEEMTRLQNSMILKAASSLDFQNDMIGSI
NRLLCEKQPNTSSSLLRQMDSKKSVFVTGNSSDAFCQTLVNTLEGTPGLRYIWNTFKPLL
QGKVLYTPDTPAVRLMMKEANSTFHALAMLKELADLWDELGPRVWDFLQNSSQVNSLRAL
LANPVIAALLNQRLNGPQWTASLLANFLYNGPPKDRPPGLPPYDWRDAYNSTTGILKLLS
SFLGCLDLNKFEAAPTESRLVGRALELLQNGTFWAGVVFENLLPNSNQPPPYVRYKIRMD
IDDAERTNKVKERLWSPGARDNSYNDLRYIWGGFAYLQDMMDHGIIRAQTSKTQPLGVFA
QQMPYPCFVNDAFLRSLARSLPLYMTLAWIYSVAMIVKGIVAEKEARLKETVRIMGLRSS
IYWLSWAVSSVLPLAVSALLLALILKYGKVLQYSDPSVIFVFLLVFCLATISQCFLISVF
FSKANLAAACGGLIYFVLYLPHILCYAWSDVMGFQAKVVVSLLSCVAFGYGCDNFAKYEQ
QGIGIQWYNIRKSPDDGERYSFVVSIIIMLFDAAFYWVLTWYIENVFPGQYGIPKPWYFP
FTASYWCGKASVTGVDHGLLKDSTVYNEYLEKPAPGMKAGVSIRNLVKIYKTGKKLAVDG
LSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIHTDMDSIRKYLGMC
PQHNVLFNDLTVEEHIYFYARLKGCSHNEVKHEMDQMIKDVGLPHKRKDLAKNLSGGMQR
KLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWDLLLKYKQGRTIILSTHHMDEADILGD
RIAIISHGKMRCCGSSLFLKKYFGSGYYLTLVREEAEKMTAQRNGIKYSQDKEEKDCPSR
DSSPDDGISSQSWDSSGLSADLTAVGQIVRRHVPEAVFLESIGQEITYILPYGGARDGTF
ALLFQELDLALADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPTTKEVLVRDCKRSSRT
SKRNSIASVHMKTEQVSKMRELKEKFTSKVDDLKRIASVSGKGSTVITGWELIRRQFLAL
FVKRFHHARRSRKGLIAQVVLPAAFVCLSLIFSLIVPPFTEYPSLELQPWMYGLPQTTFY
SKDMPDNVEVSKVVETLVNKPGFGTRCMNGDPIPKLPCSASGSGWVTPSVDQSVADIFLN
GNWNMSNPSPSCKCSTPERTIMLPDCPPGAGGLPPPQRVQNTTDTLLDLTGRNVTDFLVK
TFERSGKTRYGGISVGAVNSQVRLTEAAIEASFRDLKNLFSSFQDNLTDRIFQNAETLLK
KLGTRDNVKVWFYNQAWHGIVSFLSVANNAILRGNLPAGQDPRQYGITVSNHPLNLTKEQ
LTSIAMAATSTDLVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYWLAN
FAWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWSITPMMYPASFFFSV
PSTAYVVLTCINLFIGINGSIATFVMELINDDNISRINDIVKQVLLIFPHFCLGRGLIDM
AKNQATATLFSSFGEDRFKDPLSWDMVGKNLCAMSIQGAVMFAITILIQYKFFCKPRLIS
GKPLSAEEEDIDVARERGRVYEGKAQSDLLRIYDLTKVYSGKSTPAVDRLCVGVPAAECF
GLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNLGYCPQFDAINELLT
GREHLEFYARLRGVPEKEITMVAEWGIQKLGLVKYSNKPAGTYSGGNKRKLSTAMALIGC
PPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGRF
KCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQQSFPGSILKEKHHNTLQYQLPY
IQGALANIFSQFTSHQQRLGVEDYAVSQTTLDQVFVNFAKHQQGEEDSKAYDNTVDTSDE
LPLQSVKTFQEAEKV
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagtgatatggcccctgtttctcttcttcatactggtg
tgggtgcggtccaccaatgagccactttatcaaggccaatgccactacccaaacaaagcc
atgccttcggctggcgtgctgccctggcttcaaggtatgatctgtaacgtcaacaacccc
tgtttaaactattccacaccgggggaagcaccaggccaagtcaacaacttcaacaactcc
ataatcgctgggatgttgatagagctgcaaaccctcctggtcaacagatctattctcagc
aaggcacagtggctggcagatgacctcggccagtgggattcagtcctctcacagtctacc
cttggtaatgctaaaccaatgatcctaaggagtattctcagagacaatgaagctttctcc
acttacctgaaagagaatttgtcggttccaccatcagtggtccaaagtctcatgaatgct
gggattaatctcaatcccatgacgaggccgggcaacctgaagagcatcctgtgtgagggg
acagatctggataaatatatccaatttagcagcacagctgaaaaggtggcttttcaaaat
gtcagctgctcccgcactccacagcagctgattaacgcccaacaagtacttcttcaaaac
ctggatgcggggaaagtgctttctaaggtaccttcagctttgaatctgaatgcagcactg
atggggaaaaccactcaagatgcgttactagtgattgaggagatgaccaggttgcagaac
tccatgatccttaaagctgctagttcactggatttccaaaacgacatgattggcagtata
aataggctactgtgtgaaaagcagcccaacaccagttcgagcttactcagacagatggat
agcaagaagtcggtcttcgttacgggcaacagctccgatgcattttgtcagactcttgtc
aacaccctggagggcacacctggtctgcgctacatttggaacaccttcaagccgttattg
caaggcaaagtcctctacacacctgatacacctgctgttcgcctcatgatgaaagaggca
aacagcacattccatgccttggctatgcttaaagagcttgctgatttgtgggatgaacta
gggccacgtgtctgggatttcctccaaaatagcagtcaagtcaattcattacgggctttg
ctggcgaatccagtgattgctgctctcctcaaccagcgtctcaacggcccacaatggaca
gccagcctgctggccaacttcctgtacaacgggcctccaaaggatcgtccaccaggcttg
ccaccctatgactggcgagatgcttacaactccactacagggatcctgaagcttctctcc
agctttcttggttgtttagacctgaataagtttgaggcagcccccactgaaagccgtctg
gtgggcagagcactggagcttctgcagaatggcacattctgggccggtgttgtctttgaa
aacctcctgccaaactccaaccaacctcctccttatgtcagatacaaaatacgcatggac
attgatgatgctgagcgtaccaacaaagtgaaagaaaggttatggtctcccggagctcga
gacaactcctataacgacctgcgctatatatggggaggcttcgcctacctgcaggatatg
atggaccacggcattatacgagcgcagacgtcaaagacacaacccctgggtgtttttgcc
cagcaaatgccatacccttgctttgtgaatgacgcgttcctccggtctctggcccgctcc
ctccccttatacatgactttagcctggatctactcagtggccatgatcgttaagggaatc
gtcgcagagaaagaggcgaggcttaaggagacagtgaggatcatgggcctgagaagttcc
atctattggctgagctgggcagtatcaagtgtgctgccgctggccgtcagcgccctcctc
cttgcccttatactgaagtatggcaaggtgctacaatacagcgacccatcagtaatcttt
gtcttcctgctggtgttctgcctggccaccatcagccagtgcttcctcattagcgtcttc
ttctctaaggccaatttagcagcggcgtgcgggggactcatctactttgtcctctacctg
ccgcacatcctctgctacgcctggagcgacgtcatgggttttcaggccaaggttgttgtg
agtttgctgtcatgtgtggcctttggctatggctgtgacaactttgccaagtatgagcag
caaggcatcggtattcagtggtacaacatcagaaagagtccagacgatggagaacgctac
agcttcgtcgtctccatcatcataatgctctttgatgctgctttttactgggtgctcacc
tggtacatcgaaaatgtctttccaggacagtatggaatcccaaagccatggtacttccct
tttactgcatcttactggtgcgggaaagcctcagtgactggcgttgaccacggcttgctg
aaggactccactgtgtataatgagtatctggagaaaccagcacctggtatgaaagcaggg
gtctcaatccgcaatcttgttaaaatctacaagactggaaagaagctcgctgtggatgga
ctgagtatggacttctacgagaatcagatcacatcttttcttggccacaatggagccgga
aaaacaaccacaatgtcaattctgacagggctgttcccacctacatcaggaacagcgctc
atcaacggatatgacatccacacggacatggacagcatccgaaagtacttaggaatgtgc
ccacagcacaacgtcttattcaatgacttgacagtggaggagcatatctacttctacgcc
aggctgaaaggatgcagccacaatgaggtgaaacatgagatggaccagatgataaaggat
gtcggtttaccacataagcggaaggatcttgctaagaacttgtcaggtgggatgcagagg
aagctgtctgtggctatagcatttgtcggcggctcaaaaatcgtcatcttagatgaacct
acagcgggagtggacccctatgcacgcaggggtatctgggacttgctgttaaaatacaaa
caaggtcgcaccatcattttgtctacacatcacatggatgaggcagacatcttaggtgat
cgcattgctatcatctcccatggcaagatgcgttgctgtggctcctcactctttctaaag
aaatattttggcagcggctactacctcactctggtccgagaggaggctgaaaagatgacc
gctcaacgtaatggaatcaaatacagtcaggacaaagaggagaaagattgtccttccagg
gacagcagcccagatgatggcatcagcagccaaagctgggacagctctggtctttcagca
gatttgacagctgtgggtcaaattgtgcggcgccacgtccctgaggcagtcttcttggag
agcattggtcaagagatcacctacatactgccttacggtggagccagagatgggaccttt
gcactgctcttccaagagcttgacctagccctggctgaccttggtctgactagctacggc
atctctgacaccacgctggaggagatatttcttaaagtggcagaagataccggagtggat
gcagaaataccaacaacaaaggaggtgttggtgagagactgcaaaagaagctcccgcaca
tccaagcggaacagcatcgccagcgtccacatgaaaacagagcaagtctctaaaatgaga
gaattgaaggaaaagttcacaagtaaagtggatgacttaaagaggattgctagtgtcagt
gggaagggatccacggtcatcactggatgggagctgatcaggaggcagttccttgcgctt
ttcgtcaagcgcttccaccacgcccgaaggagccgcaagggactcattgcccaggtggtc
ttgcctgctgcgtttgtgtgcctgtctctgatcttctcgctcatcgttccgcctttcact
gaatatccgagtctggagctgcaaccctggatgtatggtctgcctcaaaccaccttttac
agcaaagatatgcctgataatgtggaggtgtctaaggttgtggaaaccttggtgaacaaa
cctggctttggaactcgctgcatgaatggagacccaataccgaagttaccatgttcagct
agtggctctggatgggttactccatctgtggatcagtccgtcgctgacattttcctcaac
ggtaactggaacatgtccaacccttccccctcctgtaagtgcagcacacctgaacggacg
atcatgttacctgactgtccacctggtgcaggagggctccctccacctcagagggtccag
aacacaacagacacattgttggatctaactggacgtaacgtgacggatttcttggtcaag
acttttgaacgctctggtaaaacaaggtacgggggcatctctgttggagcggtcaactct
caagtccgtctgactgaggcagcaatcgaagcttctttcagggatctaaaaaacctattc
agttcatttcaggataatctgactgatcggatcttccagaatgcagagacactgctaaag
aagctgggaaccagggacaacgtaaaggtgtggttctacaaccaggcgtggcacggcata
gtgtccttcctcagtgtggccaacaacgccatcttgagaggaaatctgccagcaggacag
gacccccgccagtatggcatcaccgtgtccaatcaccccctcaacctcaccaaggagcag
ctcacctctatagccatggcagcaacctccaccgacttggtggtgtccatctgcgttatc
tttgccatgtccttcatccctgccagttttgtcctcttcctcatccaagagagggtaaac
aaagccaagcatctgcaatttgtcagtggagttaacccagctgtctactggttggccaat
tttgcctgggacatgtgtaactacatcatcccatgcttgattgtgattgtgatcttcctc
tgctttcaacaaaaagcctatgtttcacctcctaacctgcctgctttgattctgctgctg
attttgtatgggtggtccatcacccccatgatgtaccctgcctcctttttcttcagcgtg
cccagcaccgcttatgtggtgctgacctgcatcaacctcttcattggtattaacggcagc
atagccacctttgttatggagctcattaatgatgataatatctcccgcatcaacgacatc
gtgaaacaggtgctgctgatattcccacatttctgtctcggcagagggctaattgacatg
gccaagaaccaggcaacagccaccctgttcagcagttttggggaagaccgtttcaaagac
ccgctcagctgggacatggtgggaaagaacctctgcgccatgtccatccagggagctgtc
atgtttgccatcacaatcctcatccagtacaaatttttctgcaagccaaggcttatttca
gggaagccattatctgcagaggaagaggatatcgatgttgctcgggaacgaggacgggtt
tatgaaggcaaggcccagagcgaccttctgaggatctatgatctcactaaggtctactct
gggaagagcacccctgccgtggacaggctgtgtgtgggagtacctgccgcagagtgtttc
ggcttgcttggaatcaacggggctggaaaaaccaccacgttcaagatgctgacaggagac
atcccagtctccggtggagaggccttcctaaacggatacagcataagaacagaaatgagg
gacgtgcaccagaacctgggttattgtcctcaatttgatgctattaatgagctgctgact
ggtcgagagcatctggagttttacgccaggctacgaggtgtaccagaaaaagagatcacc
atggtggctgagtgggggatccaaaaattgggcctggtcaaatattccaacaagccagca
ggaacttacagcggtgggaacaaacgcaaactttctacagcgatggccctgatcggttgt
cctccagtgattttcctggatgagccaaccactgggatggaccccaaagcccgacgattc
ctgtgggactgcatcttgagtgtcattaaagaaggacgctcagtcatcctcacatcacac
agtatggaggagtgtgaagcactgtgcacacgcatggccatcatggtcaacggccgcttc
aagtgcctcgggagcattcagcatttgaagagccgatttggagatggctacacagtaatt
gtgagggttggtggctctcctcctgcattgaagccagttgaggactttgtccagcagtcc
ttccctggcagtatcctgaaggagaagcatcacaacacactgcagtatcagctcccgtac
atacagggagctttggccaacatattcagccagttcaccagtcatcagcagaggttgggt
gtggaagactacgctgtgtcccagaccacgctggatcaggtctttgtgaactttgcaaag
caccagcagggagaggaggactctaaggcctatgacaacacagtggacacttcagatgag
ctgccattacagtctgtgaagaccttccaagaggcagagaaggtgtaa
DBGET
integrated database retrieval system
