Etheostoma cragini (Arkansas darter): 117934748
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Entry
117934748 CDS
T07493
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117934748
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117934748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_10
TPR_7
SH3_1
SH3_9
TPR_NPHP3
SH3_2
Motif
Other DBs
NCBI-GeneID:
117934748
NCBI-ProteinID:
XP_034712591
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All DBs
Position
19:8523402..8541146
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AA seq
1318 aa
AA seq
DB search
MSARSDRRKSPTGGQQHREAADTSNRHSRIMRGFSRDATSLKGTVSTCEENVPTALPVLL
DVVRGPERLPADEHSQEMLKGKLRILQADSTEVNALFTEMSTHLISISSEEKVIFVTFKT
FEEIWKFTTYYTIGFLGRCMENLLLDQKFWLTSLEEDIAIEVSIQENTLNLMYKGILMQE
GSLFASCSTNQMFDSSTSGGDLYLEQGDVAHFEPPFLGSGWTVLCLADGARGTAPKPALE
PVIPFHQWFLKSCAESILVGDGKPACAFPLQFARGTCLATEEYDAEGPDELSVAPGDRIV
IAGLLGSCFDWFLGRKEATGEVGLVKTSLVKPSADTYDSADIFLDGEDGTFFSLQEDKVI
EETSASLKKKSQNDTGQNYKLDMISYQDSEKKASSSRDATQQANLKRNIQRILENGKDSS
SDSIVTVNGTLEDSAWATEAENPSPPCFTVQTVVEGNNNTENFIPLFSFLEGKDYKIEFG
IMYGLSSEHLSSSIFTGHSDKDELIAFLGVARETARKKRLLWSQTRLCFLLGKLCAGRLK
LSQARVYFEEALSVPQEGFTDLRLLASIYSNLVAIYLLQKNTESFFALTERLVALLLGIP
DCLECLEDNSALKYILKKAVLSHNKMAEARACHQLAKHHWTRAEGVQVVPYLERLLVLCA
EAQRTWGISPSHEYLTLGRLYSELRLPHLSVSTARRASMQPSATLTDCLSSMGLVLDNVN
RLFGITEQEDSVPPQVAPYLYQALFSNKVQGGGSDRYHVLSHRLTVCLCQLFFKHRMVGQ
AICHMHTLINNSPTSQRPCISLPERNSALIWLAWLHIVNNQPHVALDILDSVLASMPEHC
TTPQEGVVLNMRGVALRCMGDLRRAAESYQAAVDICQEYEDMPNWAVAQANLGLLCLKAG
AKGLAQRHLTEAVQLFSELDEKGHEANFIQVLLELGQHYVKRQQLDFGKGCYEWALLLAI
SANLLDCQLTATKQLSRLYGCEIPEQAQCIIYSQHQVQLLRHTGDRAQEGDALVAISQLY
LTLATERAYRAALDFTKTSLGIFIDLGCREKEAWGWLQAGKIYHLLHQTELVDLYVQAAQ
DVALSTGDTKFILKLLEAAGDIFFNSNHDRDKAITFYRDRALPIAVKSSSVRSRLRLCNK
LTDVMLSLKLYGEAVEFAQTALDISITLGESLNERVAYHRLASLYHSLDQYELAEHHYLK
TLTLCPTTLQFDEETLYYVRVYQTLGDIIFNDLKDPFDAAGYYQLALAAAMDLGNKRSQL
QLCTRLATIYHNFLIDRELSLYFYQKARAFAAELNVRRINISPGQQCSSTAQYKTAGQ
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaggtcggaccggagaaagagcccaacaggcggccagcagcaccgcgaggcc
gcagacacatcaaacagacacagcagaataatgcgtggtttctccagagatgctacaagt
ctgaagggaactgtgtcaacatgtgaggaaaacgtcccaacagctctgccagtgctgctg
gatgtggtccggggtccggagcggcttcctgcagacgagcactcgcaggaaatgctgaaa
gggaaactgcgcattctgcaggctgacagcaccgaggtcaacgctctgttcacggagatg
tctactcatcttatctccatcagcagtgaagaaaaagtgatttttgtgacattcaaaaca
tttgaggaaatatggaagttcaccacatattacacaataggtttcctgggtcggtgtatg
gagaatctgttgctagaccagaagttctggctcacttctttggaggaggacatcgctatt
gaggtttccattcaggagaacactcttaacctgatgtacaaaggcatcctcatgcaggaa
ggctcattgtttgctagttgcagtaccaaccagatgtttgatagctccacctctggaggg
gacctgtacctggagcagggagacgtagcccattttgagcctccgtttctggggtcaggg
tggaccgtactctgcctggccgatggagcccgaggcactgcacccaaacctgctctggag
ccggtcatcccctttcatcaatggtttctcaaatcctgtgcagagagcattttagttggt
gatgggaaacctgcctgtgccttccctctgcagtttgccagagggacctgtctggcgaca
gaggagtatgatgctgagggaccagatgagctgagtgtggcacccggtgatcgtatcgtt
attgcgggacttctggggtcttgttttgattggttcttagggcggaaggaggcgacggga
gaagtgggtctggtcaagacgagcctggtgaaaccgtccgccgacacttacgactcagca
gatatttttttggatggagaggatgggacattcttcagtctgcaagaggacaaagtcata
gaggaaacatctgcctcattgaagaagaaatctcagaatgatactggccagaactacaaa
ctggatatgatcagttaccaagactctgagaaaaaagcatcatcaagcagagatgctact
cagcaagctaacctgaagagaaatattcagaggattcttgaaaatggaaaggactcttca
tcagattccatagtgaccgtgaacgggactctagaggactcggcctgggctacagaagca
gaaaacccaagcccaccctgtttcactgttcaaacagttgtggaaggaaacaacaacact
gagaacttcattccactcttctcctttttggaaggaaaagactacaaaatagagtttggc
atcatgtatggactgagttctgaacacctctcctcctccatatttaccgggcactccgac
aaggatgaactgattgccttcctgggagttgctagggaaacagccaggaagaagcgactc
ctttggtcgcagactcgtttgtgcttcctgctgggtaagctctgtgctgggaggttgaag
ttgagccaggctcgggtttactttgaggaagccctcagtgtgccgcaagaaggcttcaca
gaccttagactgttggccagcatctactccaacctagttgccatatatcttttgcagaaa
aatacagaaagtttctttgctctgacagagcgacttgttgccttgctactgggaatccca
gactgcctggaatgcttagaggacaactctgctcttaaatacatcctcaagaaagctgtt
ctctctcacaacaaaatggcagaggcccgggcttgtcaccaattggcaaagcaccactgg
actcgtgctgagggggtgcaagtggtcccttatcttgagagactacttgttctttgtgcc
gaagctcaaagaacatggggcatctctcccagtcatgagtaccttaccctgggaaggcta
tatagcgaactcagacttccccatctcagtgtcagtacagccaggagagcttctatgcag
ccctctgctacattgactgactgccttagcagcatgggtctagttctggacaatgtcaac
agactgtttgggatcacagaacaggaagactctgtcccacctcaagtagctccatattta
taccaagcgctcttttctaacaaagtccaagggggaggaagtgatcgataccacgttttg
agccatcgactcactgtttgtctctgccaactctttttcaagcacaggatggttggacaa
gccatatgccatatgcatactctcatcaacaacagtccaacctcacagcgaccctgcatc
tctctcccagaaagaaacagcgccctcatctggctggcatggcttcacattgtcaataat
cagccacatgttgctttggatatcctggactctgtcctagcttccatgccagaacactgc
actacgcctcaagaaggtgtggtcctcaacatgcggggcgtggcacttcggtgcatgggc
gacctccggagggcagcagagagttaccaggctgctgtggacatttgccaagagtatgag
gacatgccaaactgggctgtagctcaggctaaccttgggctcttatgtctgaaggccggt
gccaaaggattggcgcagaggcacctgactgaggctgtgcagctcttctctgagctggat
gaaaaaggtcatgaggcaaacttcatccaagtgctgctggagctggggcagcactatgtg
aagcgacagcagctggactttggtaaaggatgctacgaatgggctctgctgctcgctatc
agtgccaacctgttagactgccaactgactgcaaccaaacagctgagccgtctctatggg
tgtgagattccagagcaggcccagtgtatcatctacagccagcaccaggtccagctgctg
agacacacaggagacagagcacaggagggagacgcactggtagccatcagccagctctac
ctcaccctggccacagagagggcgtacagggcggctctcgacttcaccaagaccagtttg
ggtattttcatcgacctgggctgcagggagaaggaagcgtggggctggctgcaagctggg
aagatctatcacctgctgcaccagacggaactggtggacctttacgttcaggcagcacag
gatgtcgctctgagcacaggagacaccaagttcatcttgaagcttctggaagctgcaggc
gacattttcttcaacagcaaccacgacagggacaaggctatcaccttctacagggatcgt
gctctgcccattgctgtgaagagcagcagtgtgcgttccaggctgaggttgtgtaataag
ttgactgatgtgatgctcagtctcaagctgtatggtgaagctgtggagtttgctcagact
gcgctggacatcagtatcactctgggtgagagtctgaatgagcgagtggcttaccatcgg
ctggcctctctgtaccacagcctggaccagtatgaactggctgaacatcattacctgaaa
accctgaccctctgtccaacaactctacagtttgatgaggaaacactgtactatgttcgg
gtataccagacgctgggggacattatattcaatgacctgaaggacccattcgacgctgca
ggctactaccagctggctctggctgcagccatggatctgggcaacaagaggtctcagctg
cagctgtgcacccgcctcgccaccatctaccacaacttcctaatagaccgggagctctcc
ctctacttttaccagaaggctagagcatttgctgcagagctgaacgtgaggaggattaat
atctcaccgggtcagcagtgtagcagcaccgcacagtacaagaccgcgggacaatag
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