Etheostoma cragini (Arkansas darter): 117934765
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Entry
117934765 CDS
T07493
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117934765 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117934765 (sf1)
Spliceosome [BR:
ecra03041
]
Complex A
Other components
Complex A specific factors
117934765 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
117934765
NCBI-ProteinID:
XP_034712626
LinkDB
All DBs
Position
19:complement(7971143..7983827)
Genome browser
AA seq
701 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPTPGPPASFPSIQAFQPAMASASFPQ
PHQFIPGTGFSPQVPQQPTAVVGLAKPDFSQKKSRKRSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDQTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHS
NTQGGGHRSSGPNNNQPPPQNRPPWMNSGPTENRNYHGMHGGHGGHGGPHNYPPPMPNMG
GPPMPPNPNGLPPPWMQPPPPPIGQGPGPHGHPMGLLPPPMGMMPPPPPPPSNQPPPPPS
GPLPPWQQQAPPPPPTSSMATSTPLPWQQTWSSQKLHSSQARSDGCPIFGYDTTTTSSPG
TGTLPPWQQPQQPAASGAQPPPPMGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMY
APPPPPPPMDPSNFVTMMGMGVPGMPPFGMPPAPPPPPPQN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggtgcaaacgcaactcctttagggaagttgcaccctagtattggcgctaaa
cgaggatttgacgctgggcctggtgcagggaacgggttgatgccaacaccggggccgccc
gcatcatttccttctatacaagctttccagcccgcgatggcaagcgcatcttttccgcaa
ccacatcagttcattcctgggacaggtttttcgccccaggtgccacaacaaccaactgcg
gtggtcggactggccaaaccagattttagtcagaagaaatcacgaaagaggagtcgttgg
agcagtgagactcctgatcagaagacagtcataccgggcatgcccactgttattccccct
ggactgacccgggatcaagagagagcctatatagtccaactgcagattgaagaccagact
cgtaaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctcg
ccagagcccatctacaacagcgagggcaagaggttaaacacccgagagtatcggacgcga
aagaagattgaggaggagcgtcactccctcatcacagagatggttggactcaaccctgac
ttcaagcctcctgccgactacaaacctccagccaccagagtcaacgacaaagttatgatt
cctcaagatgagtaccctgaaatcaactttgttggtctgctaatcggaccacgtggtaac
actctgaagaacattgagaaggagtgctgtgccaagatcatgatccggggtaaaggttct
gtgaaggaggggaaggtaggccggaaggatggacagatgctgccaggggaagatgagcct
ctgcatgccctggtcacggccaacacaatggagaatgtcaagaaagctgtggagcagatt
cgcaacattctgaagcaaggtattgagacgcctgaggatcagaatgacctacgaaagatg
cagctgagggagctggccagactcaatggcaccctgagggaagatgacaacaggatcctt
cgtccttggcagaactctgagccacgcagcatcaccaacaccaccctctgtacaaagtgt
ggtggagcaggccacatctcctccgactgcaagtacaccagctcattcgccgcccacaga
gcaacagggggcgagccacctcagtcagcccaggacaaggctcgtatggacaaggagtat
ctgtctttgatggctgagctaggagaagctcctgtccccacatctggtggaggacactcc
aacacccaaggcggtgggcatcggtcctcaggacccaacaataaccagccgccaccgcag
aaccggcctccttggatgaactctggtccgactgagaacaggaactaccatggcatgcat
ggagggcatggtggtcatggaggaccccacaactacccgccacccatgcccaacatggga
ggaccacctatgcccccaaaccccaatggcctacctcccccgtggatgcagccccctcct
cctcctattggccagggtccaggacctcacggacaccctatgggtctgctgccacctcca
atgggcatgatgccacctccacctcctccaccgagcaatcagccgccgcctcccccttct
ggacccctgccaccatggcaacagcaggctccacctccccctcctaccagcagcatggca
actagtacaccacttccctggcaacagacttggtcgtcacaaaagttacattcaagtcag
gccaggtctgatggctgtcctatatttggttatgacaccaccaccacctccagccctggc
actggcaccttgccgccatggcagcagccccagcagcctgcagcctcaggagcccagccc
ccgccacccatgggtaccccatcaatggtgcctcctccccctggcgtccaacccccattg
cccccaggtgcccctcctcctccccctccaccacctccaggctcaactggcatgatgtat
gcccctccgccgcccccgccgcccatggacccttccaactttgtcaccatgatggggatg
ggggtaccgggcatgccccccttcggcatgcctcccgcccccccaccacctccaccccag
aattaa
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